Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.75■■■□□ 2.35
RNF135Q8IUD6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
RNF135Q8IUD6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
RNF135Q8IUD6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
RNF135Q8IUD6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.72■■■□□ 2.35
RNF135Q8IUD6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RNF135Q8IUD6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.69■■■□□ 2.34
RNF135Q8IUD6 AL391121.1-201ENST00000607967 1349 ntBASIC29.69■■■□□ 2.34
RNF135Q8IUD6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
RNF135Q8IUD6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
RNF135Q8IUD6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
RNF135Q8IUD6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
RNF135Q8IUD6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
RNF135Q8IUD6 HNRNPLP2-201ENST00000568980 1570 ntBASIC29.63■■■□□ 2.33
RNF135Q8IUD6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.62■■■□□ 2.33
RNF135Q8IUD6 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
RNF135Q8IUD6 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.58■■■□□ 2.33
RNF135Q8IUD6 HLA-V-202ENST00000446817 847 ntBASIC29.57■■■□□ 2.32
RNF135Q8IUD6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.57■■■□□ 2.32
RNF135Q8IUD6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.55■■■□□ 2.32
RNF135Q8IUD6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
RNF135Q8IUD6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.55■■■□□ 2.32
RNF135Q8IUD6 MIR3665-201ENST00000578708 105 ntBASIC29.53■■■□□ 2.32
RNF135Q8IUD6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
RNF135Q8IUD6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.52■■■□□ 2.32
RNF135Q8IUD6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.51■■■□□ 2.31
RNF135Q8IUD6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.51■■■□□ 2.31
RNF135Q8IUD6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
RNF135Q8IUD6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
RNF135Q8IUD6 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.47■■■□□ 2.31
RNF135Q8IUD6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
RNF135Q8IUD6 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RNF135Q8IUD6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RNF135Q8IUD6 AL133380.1-201ENST00000506013 324 ntBASIC29.43■■■□□ 2.3
RNF135Q8IUD6 AC087741.3-201ENST00000624270 1347 ntBASIC29.43■■■□□ 2.3
RNF135Q8IUD6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
RNF135Q8IUD6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.41■■■□□ 2.3
RNF135Q8IUD6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RNF135Q8IUD6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.39■■■□□ 2.3
RNF135Q8IUD6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
RNF135Q8IUD6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.38■■■□□ 2.29
RNF135Q8IUD6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RNF135Q8IUD6 AC145285.7-201ENST00000614819 1539 ntBASIC29.37■■■□□ 2.29
RNF135Q8IUD6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
RNF135Q8IUD6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
RNF135Q8IUD6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
RNF135Q8IUD6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.35■■■□□ 2.29
RNF135Q8IUD6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
RNF135Q8IUD6 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
RNF135Q8IUD6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.32■■■□□ 2.28
RNF135Q8IUD6 DUX4L28-201ENST00000623687 678 ntBASIC29.32■■■□□ 2.28
RNF135Q8IUD6 AC044849.2-201ENST00000606596 710 ntBASIC29.3■■■□□ 2.28
RNF135Q8IUD6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.29■■■□□ 2.28
RNF135Q8IUD6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC29.29■■■□□ 2.28
RNF135Q8IUD6 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
RNF135Q8IUD6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.28■■■□□ 2.28
RNF135Q8IUD6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
RNF135Q8IUD6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.27■■■□□ 2.28
RNF135Q8IUD6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
RNF135Q8IUD6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
RNF135Q8IUD6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
RNF135Q8IUD6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.22■■■□□ 2.27
RNF135Q8IUD6 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.21■■■□□ 2.27
RNF135Q8IUD6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.2■■■□□ 2.26
RNF135Q8IUD6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.2■■■□□ 2.26
RNF135Q8IUD6 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.2■■■□□ 2.26
RNF135Q8IUD6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.16■■■□□ 2.26
RNF135Q8IUD6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.16■■■□□ 2.26
RNF135Q8IUD6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
RNF135Q8IUD6 MIR762-201ENST00000390236 83 ntBASIC29.15■■■□□ 2.26
RNF135Q8IUD6 ZNRF2P2-203ENST00000454624 420 ntBASIC29.15■■■□□ 2.26
RNF135Q8IUD6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.14■■■□□ 2.26
RNF135Q8IUD6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
RNF135Q8IUD6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.13■■■□□ 2.25
RNF135Q8IUD6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.13■■■□□ 2.25
RNF135Q8IUD6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
RNF135Q8IUD6 AC005559.1-201ENST00000589661 871 ntBASIC29.13■■■□□ 2.25
RNF135Q8IUD6 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
RNF135Q8IUD6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.11■■■□□ 2.25
RNF135Q8IUD6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.11■■■□□ 2.25
RNF135Q8IUD6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
RNF135Q8IUD6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.1■■■□□ 2.25
RNF135Q8IUD6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.09■■■□□ 2.25
RNF135Q8IUD6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
RNF135Q8IUD6 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
RNF135Q8IUD6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.07■■■□□ 2.24
RNF135Q8IUD6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
RNF135Q8IUD6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
RNF135Q8IUD6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.02■■■□□ 2.24
RNF135Q8IUD6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.01■■■□□ 2.23
RNF135Q8IUD6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
RNF135Q8IUD6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
RNF135Q8IUD6 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
RNF135Q8IUD6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29■■■□□ 2.23
RNF135Q8IUD6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29■■■□□ 2.23
RNF135Q8IUD6 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
RNF135Q8IUD6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
RNF135Q8IUD6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
RNF135Q8IUD6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
RNF135Q8IUD6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms