Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.12■■■□□ 2.41
CTC1Q2NKJ3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CTC1Q2NKJ3 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
CTC1Q2NKJ3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CTC1Q2NKJ3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.1■■■□□ 2.41
CTC1Q2NKJ3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CTC1Q2NKJ3 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.09■■■□□ 2.41
CTC1Q2NKJ3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CTC1Q2NKJ3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CTC1Q2NKJ3 AC145285.7-201ENST00000614819 1539 ntBASIC30.04■■■□□ 2.4
CTC1Q2NKJ3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CTC1Q2NKJ3 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.03■■■□□ 2.4
CTC1Q2NKJ3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CTC1Q2NKJ3 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
CTC1Q2NKJ3 HNRNPLP2-201ENST00000568980 1570 ntBASIC29.99■■■□□ 2.39
CTC1Q2NKJ3 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CTC1Q2NKJ3 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CTC1Q2NKJ3 AL133380.1-201ENST00000506013 324 ntBASIC29.97■■■□□ 2.39
CTC1Q2NKJ3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
CTC1Q2NKJ3 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CTC1Q2NKJ3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
CTC1Q2NKJ3 ABHD17AP4-201ENST00000411545 909 ntBASIC29.94■■■□□ 2.38
CTC1Q2NKJ3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
CTC1Q2NKJ3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CTC1Q2NKJ3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
CTC1Q2NKJ3 MIR7108-201ENST00000614319 87 ntBASIC29.93■■■□□ 2.38
CTC1Q2NKJ3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.9■■■□□ 2.38
CTC1Q2NKJ3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.89■■■□□ 2.38
CTC1Q2NKJ3 MIR3665-201ENST00000578708 105 ntBASIC29.88■■■□□ 2.37
CTC1Q2NKJ3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.87■■■□□ 2.37
CTC1Q2NKJ3 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CTC1Q2NKJ3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.85■■■□□ 2.37
CTC1Q2NKJ3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CTC1Q2NKJ3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
CTC1Q2NKJ3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CTC1Q2NKJ3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.81■■■□□ 2.36
CTC1Q2NKJ3 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.81■■■□□ 2.36
CTC1Q2NKJ3 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.8■■■□□ 2.36
CTC1Q2NKJ3 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CTC1Q2NKJ3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.79■■■□□ 2.36
CTC1Q2NKJ3 AC087741.3-201ENST00000624270 1347 ntBASIC29.78■■■□□ 2.36
CTC1Q2NKJ3 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.78■■■□□ 2.36
CTC1Q2NKJ3 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CTC1Q2NKJ3 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.36
CTC1Q2NKJ3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.75■■■□□ 2.35
CTC1Q2NKJ3 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CTC1Q2NKJ3 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CTC1Q2NKJ3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CTC1Q2NKJ3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.72■■■□□ 2.35
CTC1Q2NKJ3 DUX4L28-201ENST00000623687 678 ntBASIC29.71■■■□□ 2.35
CTC1Q2NKJ3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CTC1Q2NKJ3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.35
CTC1Q2NKJ3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CTC1Q2NKJ3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.69■■■□□ 2.34
CTC1Q2NKJ3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.66■■■□□ 2.34
CTC1Q2NKJ3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.65■■■□□ 2.34
CTC1Q2NKJ3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.65■■■□□ 2.34
CTC1Q2NKJ3 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.64■■■□□ 2.34
CTC1Q2NKJ3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.63■■■□□ 2.33
CTC1Q2NKJ3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CTC1Q2NKJ3 HLA-V-202ENST00000446817 847 ntBASIC29.61■■■□□ 2.33
CTC1Q2NKJ3 AC044849.2-201ENST00000606596 710 ntBASIC29.61■■■□□ 2.33
CTC1Q2NKJ3 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.61■■■□□ 2.33
CTC1Q2NKJ3 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CTC1Q2NKJ3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.58■■■□□ 2.33
CTC1Q2NKJ3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.58■■■□□ 2.33
CTC1Q2NKJ3 MIR762-201ENST00000390236 83 ntBASIC29.57■■■□□ 2.32
CTC1Q2NKJ3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.57■■■□□ 2.32
CTC1Q2NKJ3 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CTC1Q2NKJ3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.54■■■□□ 2.32
CTC1Q2NKJ3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.54■■■□□ 2.32
CTC1Q2NKJ3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CTC1Q2NKJ3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CTC1Q2NKJ3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.53■■■□□ 2.32
CTC1Q2NKJ3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
CTC1Q2NKJ3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.52■■■□□ 2.32
CTC1Q2NKJ3 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CTC1Q2NKJ3 AC005559.1-201ENST00000589661 871 ntBASIC29.51■■■□□ 2.31
CTC1Q2NKJ3 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CTC1Q2NKJ3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.46■■■□□ 2.31
CTC1Q2NKJ3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CTC1Q2NKJ3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
CTC1Q2NKJ3 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.31
CTC1Q2NKJ3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.45■■■□□ 2.31
CTC1Q2NKJ3 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CTC1Q2NKJ3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CTC1Q2NKJ3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CTC1Q2NKJ3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.4■■■□□ 2.3
CTC1Q2NKJ3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.4■■■□□ 2.3
CTC1Q2NKJ3 ZNRF2P2-203ENST00000454624 420 ntBASIC29.4■■■□□ 2.3
CTC1Q2NKJ3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.4■■■□□ 2.3
CTC1Q2NKJ3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.39■■■□□ 2.3
CTC1Q2NKJ3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.39■■■□□ 2.3
CTC1Q2NKJ3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.39■■■□□ 2.3
CTC1Q2NKJ3 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
CTC1Q2NKJ3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.37■■■□□ 2.29
CTC1Q2NKJ3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.37■■■□□ 2.29
CTC1Q2NKJ3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.35■■■□□ 2.29
CTC1Q2NKJ3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CTC1Q2NKJ3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.34■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms