Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HIST1H2BCP62807 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HIST1H2BCP62807 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIST1H2BCP62807 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.42■■□□□ 1.02
HIST1H2BCP62807 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HIST1H2BCP62807 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HIST1H2BCP62807 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
HIST1H2BCP62807 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HIST1H2BCP62807 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HIST1H2BCP62807 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HIST1H2BCP62807 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC21.38■■□□□ 1.01
HIST1H2BCP62807 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC21.37■■□□□ 1.01
HIST1H2BCP62807 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HIST1H2BCP62807 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HIST1H2BCP62807 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HIST1H2BCP62807 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HIST1H2BCP62807 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HIST1H2BCP62807 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HIST1H2BCP62807 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
HIST1H2BCP62807 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HIST1H2BCP62807 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HIST1H2BCP62807 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.31■■□□□ 1
HIST1H2BCP62807 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
HIST1H2BCP62807 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HIST1H2BCP62807 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HIST1H2BCP62807 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.28■■□□□ 1
HIST1H2BCP62807 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.28■■□□□ 1
HIST1H2BCP62807 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HIST1H2BCP62807 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
HIST1H2BCP62807 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.27■■□□□ 1
HIST1H2BCP62807 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
HIST1H2BCP62807 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIST1H2BCP62807 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
HIST1H2BCP62807 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
HIST1H2BCP62807 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.25■□□□□ 0.99
HIST1H2BCP62807 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIST1H2BCP62807 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST1H2BCP62807 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HIST1H2BCP62807 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
HIST1H2BCP62807 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
HIST1H2BCP62807 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIST1H2BCP62807 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIST1H2BCP62807 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIST1H2BCP62807 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIST1H2BCP62807 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HIST1H2BCP62807 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
HIST1H2BCP62807 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HIST1H2BCP62807 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HIST1H2BCP62807 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HIST1H2BCP62807 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
HIST1H2BCP62807 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIST1H2BCP62807 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST1H2BCP62807 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HIST1H2BCP62807 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HIST1H2BCP62807 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
HIST1H2BCP62807 AC145285.7-201ENST00000614819 1539 ntBASIC21.14■□□□□ 0.97
HIST1H2BCP62807 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HIST1H2BCP62807 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.13■□□□□ 0.97
HIST1H2BCP62807 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
HIST1H2BCP62807 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIST1H2BCP62807 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HIST1H2BCP62807 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST1H2BCP62807 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST1H2BCP62807 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIST1H2BCP62807 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC21.09■□□□□ 0.97
HIST1H2BCP62807 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST1H2BCP62807 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.07■□□□□ 0.96
HIST1H2BCP62807 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIST1H2BCP62807 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIST1H2BCP62807 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIST1H2BCP62807 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIST1H2BCP62807 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HIST1H2BCP62807 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
HIST1H2BCP62807 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HIST1H2BCP62807 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HIST1H2BCP62807 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
HIST1H2BCP62807 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
HIST1H2BCP62807 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HIST1H2BCP62807 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HIST1H2BCP62807 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
HIST1H2BCP62807 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HIST1H2BCP62807 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H2BCP62807 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H2BCP62807 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H2BCP62807 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H2BCP62807 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H2BCP62807 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HIST1H2BCP62807 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIST1H2BCP62807 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIST1H2BCP62807 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HIST1H2BCP62807 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HIST1H2BCP62807 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.93■□□□□ 0.94
HIST1H2BCP62807 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
HIST1H2BCP62807 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.92■□□□□ 0.94
HIST1H2BCP62807 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
HIST1H2BCP62807 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HIST1H2BCP62807 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HIST1H2BCP62807 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HIST1H2BCP62807 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
HIST1H2BCP62807 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms