Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC32.16■■■□□ 2.74
CAPN2P17655 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
CAPN2P17655 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
CAPN2P17655 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC32.15■■■□□ 2.74
CAPN2P17655 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
CAPN2P17655 MLEC-202ENST00000412616 841 ntTSL 3 BASIC32.14■■■□□ 2.74
CAPN2P17655 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC32.14■■■□□ 2.74
CAPN2P17655 MIR3665-201ENST00000578708 105 ntBASIC32.14■■■□□ 2.74
CAPN2P17655 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC32.13■■■□□ 2.73
CAPN2P17655 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.11■■■□□ 2.73
CAPN2P17655 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC32.09■■■□□ 2.73
CAPN2P17655 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
CAPN2P17655 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
CAPN2P17655 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CAPN2P17655 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CAPN2P17655 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CAPN2P17655 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
CAPN2P17655 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
CAPN2P17655 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.97■■■□□ 2.71
CAPN2P17655 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.96■■■□□ 2.71
CAPN2P17655 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
CAPN2P17655 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CAPN2P17655 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.91■■■□□ 2.7
CAPN2P17655 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.91■■■□□ 2.7
CAPN2P17655 AL133380.1-201ENST00000506013 324 ntBASIC31.91■■■□□ 2.7
CAPN2P17655 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.89■■■□□ 2.7
CAPN2P17655 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.89■■■□□ 2.7
CAPN2P17655 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.88■■■□□ 2.69
CAPN2P17655 HLA-V-202ENST00000446817 847 ntBASIC31.88■■■□□ 2.69
CAPN2P17655 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CAPN2P17655 AC087741.3-201ENST00000624270 1347 ntBASIC31.86■■■□□ 2.69
CAPN2P17655 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.86■■■□□ 2.69
CAPN2P17655 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.86■■■□□ 2.69
CAPN2P17655 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CAPN2P17655 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CAPN2P17655 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CAPN2P17655 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.84■■■□□ 2.69
CAPN2P17655 AC044849.2-201ENST00000606596 710 ntBASIC31.84■■■□□ 2.69
CAPN2P17655 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CAPN2P17655 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.84■■■□□ 2.69
CAPN2P17655 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CAPN2P17655 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.82■■■□□ 2.68
CAPN2P17655 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CAPN2P17655 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.79■■■□□ 2.68
CAPN2P17655 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CAPN2P17655 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.78■■■□□ 2.68
CAPN2P17655 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CAPN2P17655 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CAPN2P17655 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.76■■■□□ 2.67
CAPN2P17655 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.74■■■□□ 2.67
CAPN2P17655 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.71■■■□□ 2.67
CAPN2P17655 DUX4L28-201ENST00000623687 678 ntBASIC31.7■■■□□ 2.67
CAPN2P17655 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.69■■■□□ 2.66
CAPN2P17655 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.68■■■□□ 2.66
CAPN2P17655 AC145285.7-201ENST00000614819 1539 ntBASIC31.65■■■□□ 2.66
CAPN2P17655 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
CAPN2P17655 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CAPN2P17655 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CAPN2P17655 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.6■■■□□ 2.65
CAPN2P17655 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
CAPN2P17655 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CAPN2P17655 AC005559.1-201ENST00000589661 871 ntBASIC31.58■■■□□ 2.65
CAPN2P17655 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
CAPN2P17655 MIR762-201ENST00000390236 83 ntBASIC31.57■■■□□ 2.64
CAPN2P17655 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.57■■■□□ 2.64
CAPN2P17655 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.56■■■□□ 2.64
CAPN2P17655 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
CAPN2P17655 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CAPN2P17655 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.54■■■□□ 2.64
CAPN2P17655 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.54■■■□□ 2.64
CAPN2P17655 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CAPN2P17655 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.52■■■□□ 2.64
CAPN2P17655 ZNRF2P2-203ENST00000454624 420 ntBASIC31.52■■■□□ 2.64
CAPN2P17655 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
CAPN2P17655 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.52■■■□□ 2.64
CAPN2P17655 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CAPN2P17655 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.49■■■□□ 2.63
CAPN2P17655 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.49■■■□□ 2.63
CAPN2P17655 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.48■■■□□ 2.63
CAPN2P17655 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CAPN2P17655 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.46■■■□□ 2.63
CAPN2P17655 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CAPN2P17655 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.43■■■□□ 2.62
CAPN2P17655 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CAPN2P17655 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.42■■■□□ 2.62
CAPN2P17655 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CAPN2P17655 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
CAPN2P17655 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CAPN2P17655 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CAPN2P17655 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.39■■■□□ 2.62
CAPN2P17655 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.36■■■□□ 2.61
CAPN2P17655 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.34■■■□□ 2.61
CAPN2P17655 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CAPN2P17655 MIR4449-201ENST00000578365 66 ntBASIC31.34■■■□□ 2.61
CAPN2P17655 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
CAPN2P17655 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CAPN2P17655 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CAPN2P17655 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CAPN2P17655 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.61
CAPN2P17655 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms