Protein–RNA interactions for Protein: O75556

SCGB2A1, Mammaglobin-B, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB2A1O75556 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
SCGB2A1O75556 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCGB2A1O75556 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC21.71■■□□□ 1.07
SCGB2A1O75556 MVK-208ENST00000539696 608 ntTSL 5 BASIC21.71■■□□□ 1.07
SCGB2A1O75556 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SCGB2A1O75556 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SCGB2A1O75556 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SCGB2A1O75556 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCGB2A1O75556 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCGB2A1O75556 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SCGB2A1O75556 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCGB2A1O75556 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCGB2A1O75556 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCGB2A1O75556 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC21.65■■□□□ 1.06
SCGB2A1O75556 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21.65■■□□□ 1.06
SCGB2A1O75556 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
SCGB2A1O75556 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC21.64■■□□□ 1.05
SCGB2A1O75556 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCGB2A1O75556 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCGB2A1O75556 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SCGB2A1O75556 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCGB2A1O75556 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCGB2A1O75556 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
SCGB2A1O75556 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCGB2A1O75556 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SCGB2A1O75556 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCGB2A1O75556 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCGB2A1O75556 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SCGB2A1O75556 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SCGB2A1O75556 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SCGB2A1O75556 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCGB2A1O75556 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
SCGB2A1O75556 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC21.56■■□□□ 1.04
SCGB2A1O75556 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SCGB2A1O75556 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC21.55■■□□□ 1.04
SCGB2A1O75556 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.55■■□□□ 1.04
SCGB2A1O75556 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
SCGB2A1O75556 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCGB2A1O75556 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SCGB2A1O75556 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCGB2A1O75556 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCGB2A1O75556 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SCGB2A1O75556 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.5■■□□□ 1.03
SCGB2A1O75556 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SCGB2A1O75556 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC21.5■■□□□ 1.03
SCGB2A1O75556 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCGB2A1O75556 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.49■■□□□ 1.03
SCGB2A1O75556 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SCGB2A1O75556 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC21.48■■□□□ 1.03
SCGB2A1O75556 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
SCGB2A1O75556 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCGB2A1O75556 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.46■■□□□ 1.03
SCGB2A1O75556 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.46■■□□□ 1.03
SCGB2A1O75556 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.46■■□□□ 1.03
SCGB2A1O75556 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21.46■■□□□ 1.03
SCGB2A1O75556 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCGB2A1O75556 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC21.45■■□□□ 1.02
SCGB2A1O75556 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCGB2A1O75556 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCGB2A1O75556 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCGB2A1O75556 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SCGB2A1O75556 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.43■■□□□ 1.02
SCGB2A1O75556 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCGB2A1O75556 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCGB2A1O75556 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCGB2A1O75556 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCGB2A1O75556 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCGB2A1O75556 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SCGB2A1O75556 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCGB2A1O75556 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.39■■□□□ 1.01
SCGB2A1O75556 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SCGB2A1O75556 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCGB2A1O75556 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCGB2A1O75556 AC120057.4-201ENST00000624722 1615 ntBASIC21.37■■□□□ 1.01
SCGB2A1O75556 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCGB2A1O75556 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCGB2A1O75556 DYNLL1-208ENST00000550178 581 ntBASIC21.37■■□□□ 1.01
SCGB2A1O75556 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCGB2A1O75556 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.37■■□□□ 1.01
SCGB2A1O75556 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCGB2A1O75556 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.36■■□□□ 1.01
SCGB2A1O75556 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC21.35■■□□□ 1.01
SCGB2A1O75556 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCGB2A1O75556 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.34■■□□□ 1.01
SCGB2A1O75556 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCGB2A1O75556 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SCGB2A1O75556 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SCGB2A1O75556 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCGB2A1O75556 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.33■■□□□ 1.01
SCGB2A1O75556 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SCGB2A1O75556 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SCGB2A1O75556 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
SCGB2A1O75556 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.32■■□□□ 1
SCGB2A1O75556 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.32■■□□□ 1
SCGB2A1O75556 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SCGB2A1O75556 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCGB2A1O75556 AP002365.1-201ENST00000603448 772 ntBASIC21.3■■□□□ 1
SCGB2A1O75556 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCGB2A1O75556 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCGB2A1O75556 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms