Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NDUFA1O15239 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NDUFA1O15239 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NDUFA1O15239 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDUFA1O15239 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NDUFA1O15239 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC18.97■□□□□ 0.63
NDUFA1O15239 AC015813.7-201ENST00000623294 581 ntBASIC18.96■□□□□ 0.63
NDUFA1O15239 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NDUFA1O15239 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDUFA1O15239 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC18.95■□□□□ 0.62
NDUFA1O15239 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
NDUFA1O15239 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NDUFA1O15239 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC18.93■□□□□ 0.62
NDUFA1O15239 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC18.93■□□□□ 0.62
NDUFA1O15239 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
NDUFA1O15239 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NDUFA1O15239 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NDUFA1O15239 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NDUFA1O15239 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC18.88■□□□□ 0.61
NDUFA1O15239 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDUFA1O15239 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDUFA1O15239 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDUFA1O15239 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NDUFA1O15239 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFA1O15239 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFA1O15239 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFA1O15239 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NDUFA1O15239 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDUFA1O15239 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NDUFA1O15239 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NDUFA1O15239 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NDUFA1O15239 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDUFA1O15239 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDUFA1O15239 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.81■□□□□ 0.6
NDUFA1O15239 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFA1O15239 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.8■□□□□ 0.6
NDUFA1O15239 ABCB10P1-201ENST00000614297 2181 ntBASIC18.8■□□□□ 0.6
NDUFA1O15239 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFA1O15239 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC18.79■□□□□ 0.6
NDUFA1O15239 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFA1O15239 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NDUFA1O15239 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NDUFA1O15239 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDUFA1O15239 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDUFA1O15239 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDUFA1O15239 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.76■□□□□ 0.59
NDUFA1O15239 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NDUFA1O15239 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NDUFA1O15239 ABCB10P3-201ENST00000561950 2166 ntBASIC18.75■□□□□ 0.59
NDUFA1O15239 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFA1O15239 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFA1O15239 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.73■□□□□ 0.59
NDUFA1O15239 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NDUFA1O15239 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NDUFA1O15239 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NDUFA1O15239 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NDUFA1O15239 AL161658.1-201ENST00000623641 1967 ntBASIC18.7■□□□□ 0.58
NDUFA1O15239 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NDUFA1O15239 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NDUFA1O15239 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDUFA1O15239 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDUFA1O15239 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDUFA1O15239 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NDUFA1O15239 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFA1O15239 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFA1O15239 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFA1O15239 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC18.65■□□□□ 0.58
NDUFA1O15239 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NDUFA1O15239 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC18.65■□□□□ 0.58
NDUFA1O15239 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDUFA1O15239 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NDUFA1O15239 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDUFA1O15239 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDUFA1O15239 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18.63■□□□□ 0.57
NDUFA1O15239 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
NDUFA1O15239 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC18.62■□□□□ 0.57
NDUFA1O15239 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFA1O15239 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.62■□□□□ 0.57
NDUFA1O15239 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDUFA1O15239 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDUFA1O15239 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDUFA1O15239 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC18.6■□□□□ 0.57
NDUFA1O15239 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC18.59■□□□□ 0.57
NDUFA1O15239 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NDUFA1O15239 AC120057.4-201ENST00000624722 1615 ntBASIC18.58■□□□□ 0.56
NDUFA1O15239 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFA1O15239 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NDUFA1O15239 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
NDUFA1O15239 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
NDUFA1O15239 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFA1O15239 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFA1O15239 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
NDUFA1O15239 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFA1O15239 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFA1O15239 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
NDUFA1O15239 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NDUFA1O15239 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.51■□□□□ 0.55
NDUFA1O15239 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDUFA1O15239 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDUFA1O15239 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms