Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC23.01■■□□□ 1.27
MSGN1A6NI15 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
MSGN1A6NI15 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23■■□□□ 1.27
MSGN1A6NI15 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
MSGN1A6NI15 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
MSGN1A6NI15 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
MSGN1A6NI15 ABCB10P1-201ENST00000614297 2181 ntBASIC22.98■■□□□ 1.27
MSGN1A6NI15 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSGN1A6NI15 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
MSGN1A6NI15 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
MSGN1A6NI15 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
MSGN1A6NI15 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
MSGN1A6NI15 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
MSGN1A6NI15 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
MSGN1A6NI15 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
MSGN1A6NI15 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
MSGN1A6NI15 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC22.89■■□□□ 1.25
MSGN1A6NI15 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.88■■□□□ 1.25
MSGN1A6NI15 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
MSGN1A6NI15 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MSGN1A6NI15 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.87■■□□□ 1.25
MSGN1A6NI15 ABCB10P3-201ENST00000561950 2166 ntBASIC22.86■■□□□ 1.25
MSGN1A6NI15 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MSGN1A6NI15 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MSGN1A6NI15 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
MSGN1A6NI15 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
MSGN1A6NI15 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
MSGN1A6NI15 AC006077.2-201ENST00000623591 457 ntBASIC22.85■■□□□ 1.25
MSGN1A6NI15 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
MSGN1A6NI15 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
MSGN1A6NI15 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
MSGN1A6NI15 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
MSGN1A6NI15 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
MSGN1A6NI15 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
MSGN1A6NI15 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
MSGN1A6NI15 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
MSGN1A6NI15 AL161658.1-201ENST00000623641 1967 ntBASIC22.8■■□□□ 1.24
MSGN1A6NI15 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC22.79■■□□□ 1.24
MSGN1A6NI15 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
MSGN1A6NI15 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
MSGN1A6NI15 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
MSGN1A6NI15 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.75■■□□□ 1.23
MSGN1A6NI15 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
MSGN1A6NI15 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
MSGN1A6NI15 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC22.74■■□□□ 1.23
MSGN1A6NI15 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
MSGN1A6NI15 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
MSGN1A6NI15 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
MSGN1A6NI15 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
MSGN1A6NI15 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
MSGN1A6NI15 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
MSGN1A6NI15 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
MSGN1A6NI15 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
MSGN1A6NI15 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
MSGN1A6NI15 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
MSGN1A6NI15 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
MSGN1A6NI15 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
MSGN1A6NI15 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
MSGN1A6NI15 ZNRF2P1-201ENST00000441407 443 ntBASIC22.69■■□□□ 1.22
MSGN1A6NI15 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
MSGN1A6NI15 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
MSGN1A6NI15 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
MSGN1A6NI15 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MSGN1A6NI15 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MSGN1A6NI15 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
MSGN1A6NI15 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC22.66■■□□□ 1.22
MSGN1A6NI15 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC22.66■■□□□ 1.22
MSGN1A6NI15 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
MSGN1A6NI15 AC139426.1-201ENST00000568218 2529 ntBASIC22.63■■□□□ 1.21
MSGN1A6NI15 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
MSGN1A6NI15 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC22.62■■□□□ 1.21
MSGN1A6NI15 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MSGN1A6NI15 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
MSGN1A6NI15 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MSGN1A6NI15 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC22.57■■□□□ 1.2
MSGN1A6NI15 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
MSGN1A6NI15 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
MSGN1A6NI15 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MSGN1A6NI15 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
MSGN1A6NI15 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
MSGN1A6NI15 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.54■■□□□ 1.2
MSGN1A6NI15 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC22.54■■□□□ 1.2
MSGN1A6NI15 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
MSGN1A6NI15 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC22.52■■□□□ 1.2
MSGN1A6NI15 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC22.52■■□□□ 1.2
MSGN1A6NI15 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MSGN1A6NI15 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MSGN1A6NI15 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
MSGN1A6NI15 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
MSGN1A6NI15 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.49■■□□□ 1.19
MSGN1A6NI15 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MSGN1A6NI15 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC22.46■■□□□ 1.19
MSGN1A6NI15 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC22.46■■□□□ 1.19
MSGN1A6NI15 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
MSGN1A6NI15 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.45■■□□□ 1.19
MSGN1A6NI15 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC22.45■■□□□ 1.19
MSGN1A6NI15 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MSGN1A6NI15 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC22.43■■□□□ 1.18
MSGN1A6NI15 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
MSGN1A6NI15 AC120057.4-201ENST00000624722 1615 ntBASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms