Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 AC015813.7-201ENST00000623294 581 ntBASIC19.77■□□□□ 0.76
TRBV27A0A0K0K1C4 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV27A0A0K0K1C4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.76■□□□□ 0.75
TRBV27A0A0K0K1C4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV27A0A0K0K1C4 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV27A0A0K0K1C4 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV27A0A0K0K1C4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.73■□□□□ 0.75
TRBV27A0A0K0K1C4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV27A0A0K0K1C4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV27A0A0K0K1C4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRBV27A0A0K0K1C4 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRBV27A0A0K0K1C4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV27A0A0K0K1C4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV27A0A0K0K1C4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV27A0A0K0K1C4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV27A0A0K0K1C4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV27A0A0K0K1C4 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.67■□□□□ 0.74
TRBV27A0A0K0K1C4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV27A0A0K0K1C4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV27A0A0K0K1C4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.65■□□□□ 0.74
TRBV27A0A0K0K1C4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.65■□□□□ 0.74
TRBV27A0A0K0K1C4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV27A0A0K0K1C4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV27A0A0K0K1C4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV27A0A0K0K1C4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TRBV27A0A0K0K1C4 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRBV27A0A0K0K1C4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV27A0A0K0K1C4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV27A0A0K0K1C4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV27A0A0K0K1C4 ABCB10P1-201ENST00000614297 2181 ntBASIC19.59■□□□□ 0.73
TRBV27A0A0K0K1C4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.59■□□□□ 0.73
TRBV27A0A0K0K1C4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV27A0A0K0K1C4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV27A0A0K0K1C4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV27A0A0K0K1C4 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRBV27A0A0K0K1C4 AC120057.4-201ENST00000624722 1615 ntBASIC19.58■□□□□ 0.73
TRBV27A0A0K0K1C4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRBV27A0A0K0K1C4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV27A0A0K0K1C4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.57■□□□□ 0.72
TRBV27A0A0K0K1C4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV27A0A0K0K1C4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.56■□□□□ 0.72
TRBV27A0A0K0K1C4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TRBV27A0A0K0K1C4 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TRBV27A0A0K0K1C4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV27A0A0K0K1C4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV27A0A0K0K1C4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.53■□□□□ 0.72
TRBV27A0A0K0K1C4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV27A0A0K0K1C4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV27A0A0K0K1C4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TRBV27A0A0K0K1C4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.52■□□□□ 0.71
TRBV27A0A0K0K1C4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TRBV27A0A0K0K1C4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV27A0A0K0K1C4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV27A0A0K0K1C4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV27A0A0K0K1C4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV27A0A0K0K1C4 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV27A0A0K0K1C4 ABCB10P3-201ENST00000561950 2166 ntBASIC19.48■□□□□ 0.71
TRBV27A0A0K0K1C4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV27A0A0K0K1C4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.47■□□□□ 0.71
TRBV27A0A0K0K1C4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.47■□□□□ 0.71
TRBV27A0A0K0K1C4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV27A0A0K0K1C4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV27A0A0K0K1C4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV27A0A0K0K1C4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV27A0A0K0K1C4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
TRBV27A0A0K0K1C4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV27A0A0K0K1C4 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.42■□□□□ 0.7
TRBV27A0A0K0K1C4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV27A0A0K0K1C4 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV27A0A0K0K1C4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV27A0A0K0K1C4 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC19.4■□□□□ 0.7
TRBV27A0A0K0K1C4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV27A0A0K0K1C4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TRBV27A0A0K0K1C4 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV27A0A0K0K1C4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV27A0A0K0K1C4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV27A0A0K0K1C4 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV27A0A0K0K1C4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV27A0A0K0K1C4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
TRBV27A0A0K0K1C4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
TRBV27A0A0K0K1C4 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
TRBV27A0A0K0K1C4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV27A0A0K0K1C4 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.35■□□□□ 0.69
TRBV27A0A0K0K1C4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV27A0A0K0K1C4 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.34■□□□□ 0.69
TRBV27A0A0K0K1C4 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.34■□□□□ 0.69
TRBV27A0A0K0K1C4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV27A0A0K0K1C4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRBV27A0A0K0K1C4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV27A0A0K0K1C4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TRBV27A0A0K0K1C4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRBV27A0A0K0K1C4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV27A0A0K0K1C4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TRBV27A0A0K0K1C4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV27A0A0K0K1C4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRBV27A0A0K0K1C4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV27A0A0K0K1C4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.3■□□□□ 0.68
TRBV27A0A0K0K1C4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV27A0A0K0K1C4 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TRBV27A0A0K0K1C4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms