Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.67■□□□□ 0.9
IGKV3D-20A0A0C4DH25 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
IGKV3D-20A0A0C4DH25 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
IGKV3D-20A0A0C4DH25 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IGKV3D-20A0A0C4DH25 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IGKV3D-20A0A0C4DH25 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
IGKV3D-20A0A0C4DH25 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IGKV3D-20A0A0C4DH25 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
IGKV3D-20A0A0C4DH25 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.59■□□□□ 0.89
IGKV3D-20A0A0C4DH25 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IGKV3D-20A0A0C4DH25 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
IGKV3D-20A0A0C4DH25 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
IGKV3D-20A0A0C4DH25 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
IGKV3D-20A0A0C4DH25 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
IGKV3D-20A0A0C4DH25 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
IGKV3D-20A0A0C4DH25 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IGKV3D-20A0A0C4DH25 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IGKV3D-20A0A0C4DH25 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
IGKV3D-20A0A0C4DH25 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.54■□□□□ 0.88
IGKV3D-20A0A0C4DH25 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
IGKV3D-20A0A0C4DH25 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.52■□□□□ 0.88
IGKV3D-20A0A0C4DH25 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
IGKV3D-20A0A0C4DH25 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
IGKV3D-20A0A0C4DH25 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.5■□□□□ 0.87
IGKV3D-20A0A0C4DH25 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IGKV3D-20A0A0C4DH25 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.49■□□□□ 0.87
IGKV3D-20A0A0C4DH25 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.49■□□□□ 0.87
IGKV3D-20A0A0C4DH25 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.48■□□□□ 0.87
IGKV3D-20A0A0C4DH25 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IGKV3D-20A0A0C4DH25 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
IGKV3D-20A0A0C4DH25 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
IGKV3D-20A0A0C4DH25 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
IGKV3D-20A0A0C4DH25 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.45■□□□□ 0.86
IGKV3D-20A0A0C4DH25 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IGKV3D-20A0A0C4DH25 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.44■□□□□ 0.86
IGKV3D-20A0A0C4DH25 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
IGKV3D-20A0A0C4DH25 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
IGKV3D-20A0A0C4DH25 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IGKV3D-20A0A0C4DH25 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
IGKV3D-20A0A0C4DH25 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.43■□□□□ 0.86
IGKV3D-20A0A0C4DH25 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
IGKV3D-20A0A0C4DH25 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
IGKV3D-20A0A0C4DH25 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
IGKV3D-20A0A0C4DH25 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
IGKV3D-20A0A0C4DH25 AC120057.4-201ENST00000624722 1615 ntBASIC20.39■□□□□ 0.86
IGKV3D-20A0A0C4DH25 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
IGKV3D-20A0A0C4DH25 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IGKV3D-20A0A0C4DH25 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IGKV3D-20A0A0C4DH25 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IGKV3D-20A0A0C4DH25 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.37■□□□□ 0.85
IGKV3D-20A0A0C4DH25 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC20.37■□□□□ 0.85
IGKV3D-20A0A0C4DH25 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC20.37■□□□□ 0.85
IGKV3D-20A0A0C4DH25 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
IGKV3D-20A0A0C4DH25 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
IGKV3D-20A0A0C4DH25 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.35■□□□□ 0.85
IGKV3D-20A0A0C4DH25 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
IGKV3D-20A0A0C4DH25 ABCB10P1-201ENST00000614297 2181 ntBASIC20.34■□□□□ 0.85
IGKV3D-20A0A0C4DH25 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.33■□□□□ 0.85
IGKV3D-20A0A0C4DH25 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
IGKV3D-20A0A0C4DH25 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
IGKV3D-20A0A0C4DH25 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IGKV3D-20A0A0C4DH25 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IGKV3D-20A0A0C4DH25 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
IGKV3D-20A0A0C4DH25 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IGKV3D-20A0A0C4DH25 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IGKV3D-20A0A0C4DH25 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IGKV3D-20A0A0C4DH25 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IGKV3D-20A0A0C4DH25 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
IGKV3D-20A0A0C4DH25 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IGKV3D-20A0A0C4DH25 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.26■□□□□ 0.83
IGKV3D-20A0A0C4DH25 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
IGKV3D-20A0A0C4DH25 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
IGKV3D-20A0A0C4DH25 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
IGKV3D-20A0A0C4DH25 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.25■□□□□ 0.83
IGKV3D-20A0A0C4DH25 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IGKV3D-20A0A0C4DH25 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
IGKV3D-20A0A0C4DH25 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IGKV3D-20A0A0C4DH25 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IGKV3D-20A0A0C4DH25 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IGKV3D-20A0A0C4DH25 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IGKV3D-20A0A0C4DH25 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IGKV3D-20A0A0C4DH25 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IGKV3D-20A0A0C4DH25 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.2■□□□□ 0.82
IGKV3D-20A0A0C4DH25 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.19■□□□□ 0.82
IGKV3D-20A0A0C4DH25 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IGKV3D-20A0A0C4DH25 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.19■□□□□ 0.82
IGKV3D-20A0A0C4DH25 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
IGKV3D-20A0A0C4DH25 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
IGKV3D-20A0A0C4DH25 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.18■□□□□ 0.82
IGKV3D-20A0A0C4DH25 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
IGKV3D-20A0A0C4DH25 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
IGKV3D-20A0A0C4DH25 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
IGKV3D-20A0A0C4DH25 ABCB10P3-201ENST00000561950 2166 ntBASIC20.16■□□□□ 0.82
IGKV3D-20A0A0C4DH25 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IGKV3D-20A0A0C4DH25 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IGKV3D-20A0A0C4DH25 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
IGKV3D-20A0A0C4DH25 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.14■□□□□ 0.81
IGKV3D-20A0A0C4DH25 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
IGKV3D-20A0A0C4DH25 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
IGKV3D-20A0A0C4DH25 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms