Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRAV5A0A0B4J249 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRAV5A0A0B4J249 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRAV5A0A0B4J249 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.58■■□□□ 1.05
TRAV5A0A0B4J249 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRAV5A0A0B4J249 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.57■■□□□ 1.04
TRAV5A0A0B4J249 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRAV5A0A0B4J249 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRAV5A0A0B4J249 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAV5A0A0B4J249 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV5A0A0B4J249 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRAV5A0A0B4J249 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.52■■□□□ 1.04
TRAV5A0A0B4J249 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAV5A0A0B4J249 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV5A0A0B4J249 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV5A0A0B4J249 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV5A0A0B4J249 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC21.48■■□□□ 1.03
TRAV5A0A0B4J249 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV5A0A0B4J249 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.47■■□□□ 1.03
TRAV5A0A0B4J249 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TRAV5A0A0B4J249 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV5A0A0B4J249 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRAV5A0A0B4J249 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAV5A0A0B4J249 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.44■■□□□ 1.02
TRAV5A0A0B4J249 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.43■■□□□ 1.02
TRAV5A0A0B4J249 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC21.43■■□□□ 1.02
TRAV5A0A0B4J249 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
TRAV5A0A0B4J249 ABCB10P1-201ENST00000614297 2181 ntBASIC21.4■■□□□ 1.02
TRAV5A0A0B4J249 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV5A0A0B4J249 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV5A0A0B4J249 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
TRAV5A0A0B4J249 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV5A0A0B4J249 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRAV5A0A0B4J249 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TRAV5A0A0B4J249 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV5A0A0B4J249 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV5A0A0B4J249 AC120057.4-201ENST00000624722 1615 ntBASIC21.38■■□□□ 1.01
TRAV5A0A0B4J249 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TRAV5A0A0B4J249 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV5A0A0B4J249 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV5A0A0B4J249 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV5A0A0B4J249 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRAV5A0A0B4J249 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC21.33■■□□□ 1.01
TRAV5A0A0B4J249 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.33■■□□□ 1
TRAV5A0A0B4J249 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
TRAV5A0A0B4J249 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV5A0A0B4J249 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV5A0A0B4J249 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAV5A0A0B4J249 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
TRAV5A0A0B4J249 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC21.32■■□□□ 1
TRAV5A0A0B4J249 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRAV5A0A0B4J249 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAV5A0A0B4J249 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAV5A0A0B4J249 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAV5A0A0B4J249 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC21.28■■□□□ 1
TRAV5A0A0B4J249 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV5A0A0B4J249 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV5A0A0B4J249 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC21.26■□□□□ 0.99
TRAV5A0A0B4J249 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.26■□□□□ 0.99
TRAV5A0A0B4J249 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV5A0A0B4J249 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV5A0A0B4J249 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV5A0A0B4J249 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.24■□□□□ 0.99
TRAV5A0A0B4J249 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.23■□□□□ 0.99
TRAV5A0A0B4J249 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV5A0A0B4J249 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV5A0A0B4J249 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV5A0A0B4J249 ABCB10P3-201ENST00000561950 2166 ntBASIC21.21■□□□□ 0.99
TRAV5A0A0B4J249 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV5A0A0B4J249 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV5A0A0B4J249 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
TRAV5A0A0B4J249 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV5A0A0B4J249 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
TRAV5A0A0B4J249 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TRAV5A0A0B4J249 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV5A0A0B4J249 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV5A0A0B4J249 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV5A0A0B4J249 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV5A0A0B4J249 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
TRAV5A0A0B4J249 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV5A0A0B4J249 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV5A0A0B4J249 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.15■□□□□ 0.98
TRAV5A0A0B4J249 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.14■□□□□ 0.98
TRAV5A0A0B4J249 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
TRAV5A0A0B4J249 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TRAV5A0A0B4J249 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TRAV5A0A0B4J249 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV5A0A0B4J249 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.12■□□□□ 0.97
TRAV5A0A0B4J249 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAV5A0A0B4J249 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAV5A0A0B4J249 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV5A0A0B4J249 AC139426.1-201ENST00000568218 2529 ntBASIC21.09■□□□□ 0.97
TRAV5A0A0B4J249 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV5A0A0B4J249 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV5A0A0B4J249 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
TRAV5A0A0B4J249 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV5A0A0B4J249 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TRAV5A0A0B4J249 MVK-208ENST00000539696 608 ntTSL 5 BASIC21.05■□□□□ 0.96
TRAV5A0A0B4J249 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV5A0A0B4J249 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms