Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV13-2A0A0B4J235 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRAV13-2A0A0B4J235 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV13-2A0A0B4J235 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV13-2A0A0B4J235 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV13-2A0A0B4J235 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV13-2A0A0B4J235 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV13-2A0A0B4J235 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV13-2A0A0B4J235 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV13-2A0A0B4J235 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV13-2A0A0B4J235 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV13-2A0A0B4J235 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV13-2A0A0B4J235 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV13-2A0A0B4J235 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV13-2A0A0B4J235 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
TRAV13-2A0A0B4J235 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV13-2A0A0B4J235 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV13-2A0A0B4J235 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV13-2A0A0B4J235 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC18.34■□□□□ 0.53
TRAV13-2A0A0B4J235 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV13-2A0A0B4J235 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV13-2A0A0B4J235 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV13-2A0A0B4J235 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TRAV13-2A0A0B4J235 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV13-2A0A0B4J235 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV13-2A0A0B4J235 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV13-2A0A0B4J235 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV13-2A0A0B4J235 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TRAV13-2A0A0B4J235 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV13-2A0A0B4J235 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV13-2A0A0B4J235 ABCB10P1-201ENST00000614297 2181 ntBASIC18.29■□□□□ 0.52
TRAV13-2A0A0B4J235 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV13-2A0A0B4J235 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAV13-2A0A0B4J235 ABCB10P3-201ENST00000561950 2166 ntBASIC18.28■□□□□ 0.52
TRAV13-2A0A0B4J235 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV13-2A0A0B4J235 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAV13-2A0A0B4J235 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV13-2A0A0B4J235 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV13-2A0A0B4J235 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV13-2A0A0B4J235 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC18.25■□□□□ 0.51
TRAV13-2A0A0B4J235 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV13-2A0A0B4J235 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV13-2A0A0B4J235 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV13-2A0A0B4J235 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV13-2A0A0B4J235 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV13-2A0A0B4J235 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC18.23■□□□□ 0.51
TRAV13-2A0A0B4J235 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV13-2A0A0B4J235 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV13-2A0A0B4J235 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRAV13-2A0A0B4J235 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV13-2A0A0B4J235 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRAV13-2A0A0B4J235 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV13-2A0A0B4J235 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV13-2A0A0B4J235 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV13-2A0A0B4J235 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV13-2A0A0B4J235 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV13-2A0A0B4J235 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV13-2A0A0B4J235 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV13-2A0A0B4J235 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV13-2A0A0B4J235 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV13-2A0A0B4J235 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV13-2A0A0B4J235 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV13-2A0A0B4J235 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV13-2A0A0B4J235 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV13-2A0A0B4J235 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAV13-2A0A0B4J235 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV13-2A0A0B4J235 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV13-2A0A0B4J235 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV13-2A0A0B4J235 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV13-2A0A0B4J235 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV13-2A0A0B4J235 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV13-2A0A0B4J235 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TRAV13-2A0A0B4J235 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV13-2A0A0B4J235 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV13-2A0A0B4J235 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
TRAV13-2A0A0B4J235 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRAV13-2A0A0B4J235 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV13-2A0A0B4J235 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV13-2A0A0B4J235 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV13-2A0A0B4J235 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV13-2A0A0B4J235 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV13-2A0A0B4J235 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRAV13-2A0A0B4J235 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRAV13-2A0A0B4J235 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV13-2A0A0B4J235 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV13-2A0A0B4J235 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV13-2A0A0B4J235 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV13-2A0A0B4J235 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV13-2A0A0B4J235 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV13-2A0A0B4J235 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV13-2A0A0B4J235 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.02■□□□□ 0.47
TRAV13-2A0A0B4J235 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
TRAV13-2A0A0B4J235 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV13-2A0A0B4J235 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV13-2A0A0B4J235 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
TRAV13-2A0A0B4J235 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV13-2A0A0B4J235 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC18.01■□□□□ 0.47
TRAV13-2A0A0B4J235 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV13-2A0A0B4J235 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV13-2A0A0B4J235 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 7.4 ms