Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 HADH-202ENST00000403312 1752 ntTSL 5 BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 AC005722.1-201ENST00000431878 964 ntBASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 RPL35P9-201ENST00000446059 350 ntBASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 EEF1GP8-201ENST00000506566 1154 ntBASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 COQ10BP2-201ENST00000513804 724 ntBASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 AC226150.1-201ENST00000544259 466 ntBASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 AC117503.4-201ENST00000623229 1418 ntBASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HMG20BQ9P0W2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 LINC00634-202ENST00000505157 222 ntBASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 AC093826.1-201ENST00000508655 993 ntBASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 AC012073.1-201ENST00000606114 1108 ntBASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 GARS-210ENST00000627489 324 ntTSL 4 BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.91■□□□□ 0.3
HMG20BQ9P0W2 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms