Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 NDUFAB1P1-201ENST00000404262 460 ntBASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 OLR1-203ENST00000432556 950 ntTSL 2 BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 IFT20-216ENST00000588477 774 ntTSL 5 BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 CYGB-203ENST00000589145 788 ntTSL 3 BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 AC009955.4-201ENST00000597192 544 ntBASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 AC010328.2-201ENST00000597698 1111 ntBASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 MIR6720-201ENST00000611664 98 ntBASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 LINC01165-201ENST00000445190 1623 ntBASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
RTN4IP1Q8WWV3 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
RTN4IP1Q8WWV3 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
RTN4IP1Q8WWV3 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
RTN4IP1Q8WWV3 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
RTN4IP1Q8WWV3 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
RTN4IP1Q8WWV3 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 ATP5G2P4-201ENST00000442175 420 ntBASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 RNA5SP412-201ENST00000516234 123 ntBASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC11.83□□□□□ -0.52
RTN4IP1Q8WWV3 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms