Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
AP1S1P61966 YRDCP1-201ENST00000621419 643 ntBASIC14.02□□□□□ -0.17
AP1S1P61966 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC14.02□□□□□ -0.17
AP1S1P61966 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
AP1S1P61966 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP1S1P61966 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP1S1P61966 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP1S1P61966 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP1S1P61966 AC130686.1-201ENST00000622936 2466 ntBASIC14.02□□□□□ -0.17
AP1S1P61966 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.02□□□□□ -0.17
AP1S1P61966 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
AP1S1P61966 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP1S1P61966 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP1S1P61966 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP1S1P61966 DMBT1P1-203ENST00000636837 4628 ntBASIC14.02□□□□□ -0.17
AP1S1P61966 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.02□□□□□ -0.17
AP1S1P61966 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.01□□□□□ -0.17
AP1S1P61966 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.01□□□□□ -0.17
AP1S1P61966 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S1P61966 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S1P61966 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
AP1S1P61966 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
AP1S1P61966 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S1P61966 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S1P61966 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S1P61966 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S1P61966 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.01□□□□□ -0.17
AP1S1P61966 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
AP1S1P61966 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.01□□□□□ -0.17
AP1S1P61966 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S1P61966 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S1P61966 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S1P61966 OR52M2P-201ENST00000414298 959 ntBASIC14.01□□□□□ -0.17
AP1S1P61966 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.01□□□□□ -0.17
AP1S1P61966 CSNK1G2P1-201ENST00000442675 955 ntBASIC14.01□□□□□ -0.17
AP1S1P61966 RN7SL181P-201ENST00000462921 277 ntBASIC14.01□□□□□ -0.17
AP1S1P61966 AP000911.2-201ENST00000534330 502 ntBASIC14.01□□□□□ -0.17
AP1S1P61966 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.01□□□□□ -0.17
AP1S1P61966 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC14.01□□□□□ -0.17
AP1S1P61966 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC14.01□□□□□ -0.17
AP1S1P61966 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S1P61966 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.01□□□□□ -0.17
AP1S1P61966 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
AP1S1P61966 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S1P61966 AC245140.2-201ENST00000624054 1939 ntBASIC14.01□□□□□ -0.17
AP1S1P61966 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S1P61966 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S1P61966 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S1P61966 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S1P61966 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S1P61966 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S1P61966 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
AP1S1P61966 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.01□□□□□ -0.17
AP1S1P61966 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S1P61966 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S1P61966 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
AP1S1P61966 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S1P61966 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP1S1P61966 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.01□□□□□ -0.17
AP1S1P61966 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC14□□□□□ -0.17
AP1S1P61966 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AP1S1P61966 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14□□□□□ -0.17
AP1S1P61966 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC14□□□□□ -0.17
AP1S1P61966 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AP1S1P61966 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14□□□□□ -0.17
AP1S1P61966 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
AP1S1P61966 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14□□□□□ -0.17
AP1S1P61966 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
AP1S1P61966 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
AP1S1P61966 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC14□□□□□ -0.17
AP1S1P61966 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC14□□□□□ -0.17
AP1S1P61966 HINT2P1-201ENST00000419438 481 ntBASIC14□□□□□ -0.17
AP1S1P61966 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14□□□□□ -0.17
AP1S1P61966 AL354861.1-201ENST00000445213 355 ntBASIC14□□□□□ -0.17
AP1S1P61966 RPL18AP3-201ENST00000462885 528 ntBASIC14□□□□□ -0.17
AP1S1P61966 RN7SKP155-201ENST00000516031 288 ntBASIC14□□□□□ -0.17
AP1S1P61966 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC14□□□□□ -0.17
AP1S1P61966 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14□□□□□ -0.17
AP1S1P61966 RN7SL470P-201ENST00000583069 259 ntBASIC14□□□□□ -0.17
AP1S1P61966 RPL17P45-201ENST00000586289 509 ntBASIC14□□□□□ -0.17
AP1S1P61966 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC14□□□□□ -0.17
AP1S1P61966 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14□□□□□ -0.17
AP1S1P61966 AL009176.1-201ENST00000607876 650 ntBASIC14□□□□□ -0.17
AP1S1P61966 AC092171.5-201ENST00000608012 942 ntBASIC14□□□□□ -0.17
AP1S1P61966 COX6A1P2-201ENST00000620597 330 ntBASIC14□□□□□ -0.17
AP1S1P61966 Z98885.3-201ENST00000624882 1757 ntBASIC14□□□□□ -0.17
AP1S1P61966 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14□□□□□ -0.17
AP1S1P61966 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14□□□□□ -0.17
AP1S1P61966 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms