Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
GFRA1P56159 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
GFRA1P56159 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
GFRA1P56159 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.46□□□□□ -0.42
GFRA1P56159 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
GFRA1P56159 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
GFRA1P56159 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
GFRA1P56159 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.46□□□□□ -0.42
GFRA1P56159 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.46□□□□□ -0.42
GFRA1P56159 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
GFRA1P56159 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
GFRA1P56159 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.45□□□□□ -0.42
GFRA1P56159 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.45□□□□□ -0.42
GFRA1P56159 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
GFRA1P56159 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
GFRA1P56159 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC12.45□□□□□ -0.42
GFRA1P56159 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
GFRA1P56159 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
GFRA1P56159 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
GFRA1P56159 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 AC072061.1-201ENST00000569710 2234 ntBASIC12.45□□□□□ -0.42
GFRA1P56159 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
GFRA1P56159 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 BAK1P1-201ENST00000317045 636 ntBASIC12.45□□□□□ -0.42
GFRA1P56159 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.45□□□□□ -0.42
GFRA1P56159 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC12.45□□□□□ -0.42
GFRA1P56159 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
GFRA1P56159 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC12.45□□□□□ -0.42
GFRA1P56159 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC12.45□□□□□ -0.42
GFRA1P56159 GNG10P1-201ENST00000452289 199 ntBASIC12.45□□□□□ -0.42
GFRA1P56159 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC12.45□□□□□ -0.42
GFRA1P56159 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC12.45□□□□□ -0.42
GFRA1P56159 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC12.45□□□□□ -0.42
GFRA1P56159 OR2A1-AS1-210ENST00000496968 531 ntBASIC12.45□□□□□ -0.42
GFRA1P56159 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.45□□□□□ -0.42
GFRA1P56159 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC12.45□□□□□ -0.42
GFRA1P56159 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC12.45□□□□□ -0.42
GFRA1P56159 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC12.45□□□□□ -0.42
GFRA1P56159 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
GFRA1P56159 AL356740.1-201ENST00000602192 1297 ntBASIC12.45□□□□□ -0.42
GFRA1P56159 AC138466.5-201ENST00000624002 808 ntBASIC12.45□□□□□ -0.42
GFRA1P56159 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 AC020763.3-201ENST00000625095 2904 ntBASIC12.45□□□□□ -0.42
GFRA1P56159 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC12.45□□□□□ -0.42
GFRA1P56159 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
GFRA1P56159 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.45□□□□□ -0.42
GFRA1P56159 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
GFRA1P56159 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
GFRA1P56159 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.45□□□□□ -0.42
GFRA1P56159 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
GFRA1P56159 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
GFRA1P56159 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GFRA1P56159 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
GFRA1P56159 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.45□□□□□ -0.42
GFRA1P56159 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GFRA1P56159 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.44□□□□□ -0.42
GFRA1P56159 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
GFRA1P56159 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
GFRA1P56159 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GFRA1P56159 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
GFRA1P56159 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.44□□□□□ -0.42
GFRA1P56159 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GFRA1P56159 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GFRA1P56159 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.44□□□□□ -0.42
GFRA1P56159 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GFRA1P56159 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms