Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NEDD4P46934 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.34■□□□□ 0.21
NEDD4P46934 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NEDD4P46934 Z69890.1-201ENST00000382990 339 ntBASIC16.34■□□□□ 0.21
NEDD4P46934 AL391647.1-201ENST00000395664 511 ntBASIC16.34■□□□□ 0.21
NEDD4P46934 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NEDD4P46934 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.34■□□□□ 0.21
NEDD4P46934 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.34■□□□□ 0.21
NEDD4P46934 AL354861.1-201ENST00000445213 355 ntBASIC16.34■□□□□ 0.21
NEDD4P46934 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NEDD4P46934 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NEDD4P46934 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.34■□□□□ 0.21
NEDD4P46934 AL009176.1-201ENST00000607876 650 ntBASIC16.34■□□□□ 0.21
NEDD4P46934 AP000322.3-201ENST00000608665 388 ntBASIC16.34■□□□□ 0.21
NEDD4P46934 LINC00244-201ENST00000625073 613 ntBASIC16.34■□□□□ 0.21
NEDD4P46934 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC16.34■□□□□ 0.21
NEDD4P46934 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NEDD4P46934 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC16.34■□□□□ 0.21
NEDD4P46934 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NEDD4P46934 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NEDD4P46934 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.34■□□□□ 0.21
NEDD4P46934 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.34■□□□□ 0.21
NEDD4P46934 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.34■□□□□ 0.21
NEDD4P46934 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC16.34■□□□□ 0.21
NEDD4P46934 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NEDD4P46934 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NEDD4P46934 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NEDD4P46934 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NEDD4P46934 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
NEDD4P46934 AC004241.5-201ENST00000623870 2448 ntBASIC16.34■□□□□ 0.21
NEDD4P46934 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.34■□□□□ 0.21
NEDD4P46934 DDC-214ENST00000622873 1839 ntTSL 3 BASIC16.34■□□□□ 0.21
NEDD4P46934 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC16.34■□□□□ 0.21
NEDD4P46934 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
NEDD4P46934 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC16.33■□□□□ 0.21
NEDD4P46934 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.33■□□□□ 0.21
NEDD4P46934 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC16.33■□□□□ 0.21
NEDD4P46934 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC16.33■□□□□ 0.21
NEDD4P46934 PXK-210ENST00000479241 2817 ntTSL 2 BASIC16.33■□□□□ 0.21
NEDD4P46934 ZNF493-208ENST00000599461 1769 ntBASIC16.33■□□□□ 0.21
NEDD4P46934 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NEDD4P46934 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
NEDD4P46934 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NEDD4P46934 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NEDD4P46934 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 DPY19L2P5-201ENST00000456300 331 ntBASIC16.33■□□□□ 0.2
NEDD4P46934 RN7SL375P-201ENST00000492442 298 ntBASIC16.33■□□□□ 0.2
NEDD4P46934 HINT1-205ENST00000508488 703 ntTSL 2 BASIC16.33■□□□□ 0.2
NEDD4P46934 RNA5SP406-201ENST00000516106 112 ntBASIC16.33■□□□□ 0.2
NEDD4P46934 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NEDD4P46934 NPM1P43-201ENST00000558669 786 ntBASIC16.33■□□□□ 0.2
NEDD4P46934 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC16.33■□□□□ 0.2
NEDD4P46934 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 NUDT4P2-201ENST00000578341 546 ntBASIC16.33■□□□□ 0.2
NEDD4P46934 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.33■□□□□ 0.2
NEDD4P46934 AC012073.1-201ENST00000606114 1108 ntBASIC16.33■□□□□ 0.2
NEDD4P46934 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
NEDD4P46934 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
NEDD4P46934 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
NEDD4P46934 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
NEDD4P46934 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC16.33■□□□□ 0.2
NEDD4P46934 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC16.33■□□□□ 0.2
NEDD4P46934 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NEDD4P46934 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC16.33■□□□□ 0.2
NEDD4P46934 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC16.33■□□□□ 0.2
NEDD4P46934 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
NEDD4P46934 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 EML1-203ENST00000334192 4064 ntTSL 5 BASIC16.32■□□□□ 0.2
NEDD4P46934 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC16.32■□□□□ 0.2
NEDD4P46934 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms