Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC14.76□□□□□ -0.05
BRCC3P46736 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC14.76□□□□□ -0.05
BRCC3P46736 KRT18P46-201ENST00000435568 1279 ntBASIC14.76□□□□□ -0.05
BRCC3P46736 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC14.76□□□□□ -0.05
BRCC3P46736 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC14.76□□□□□ -0.05
BRCC3P46736 AC090136.2-201ENST00000517809 420 ntBASIC14.76□□□□□ -0.05
BRCC3P46736 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCC3P46736 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC14.76□□□□□ -0.05
BRCC3P46736 AC011247.3-201ENST00000603297 438 ntBASIC14.76□□□□□ -0.05
BRCC3P46736 AL136982.5-201ENST00000605222 294 ntBASIC14.76□□□□□ -0.05
BRCC3P46736 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BRCC3P46736 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
BRCC3P46736 AC020763.3-201ENST00000625095 2904 ntBASIC14.76□□□□□ -0.05
BRCC3P46736 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCC3P46736 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.76□□□□□ -0.05
BRCC3P46736 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCC3P46736 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCC3P46736 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BRCC3P46736 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.76□□□□□ -0.05
BRCC3P46736 KRT8P24-201ENST00000560290 1559 ntBASIC14.76□□□□□ -0.05
BRCC3P46736 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.76□□□□□ -0.05
BRCC3P46736 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCC3P46736 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BRCC3P46736 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BRCC3P46736 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.76□□□□□ -0.05
BRCC3P46736 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC14.76□□□□□ -0.05
BRCC3P46736 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
BRCC3P46736 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCC3P46736 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BRCC3P46736 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCC3P46736 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCC3P46736 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
BRCC3P46736 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.75□□□□□ -0.05
BRCC3P46736 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.75□□□□□ -0.05
BRCC3P46736 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
BRCC3P46736 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
BRCC3P46736 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.75□□□□□ -0.05
BRCC3P46736 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.75□□□□□ -0.05
BRCC3P46736 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
BRCC3P46736 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
BRCC3P46736 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
BRCC3P46736 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC14.75□□□□□ -0.05
BRCC3P46736 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC14.75□□□□□ -0.05
BRCC3P46736 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC14.75□□□□□ -0.05
BRCC3P46736 AC007279.1-201ENST00000448547 837 ntBASIC14.75□□□□□ -0.05
BRCC3P46736 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC14.75□□□□□ -0.05
BRCC3P46736 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
BRCC3P46736 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC14.75□□□□□ -0.05
BRCC3P46736 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC14.75□□□□□ -0.05
BRCC3P46736 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC14.75□□□□□ -0.05
BRCC3P46736 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC14.75□□□□□ -0.05
BRCC3P46736 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC14.75□□□□□ -0.05
BRCC3P46736 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
BRCC3P46736 CR392039.2-201ENST00000623182 509 ntBASIC14.75□□□□□ -0.05
BRCC3P46736 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC14.75□□□□□ -0.05
BRCC3P46736 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.75□□□□□ -0.05
BRCC3P46736 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
BRCC3P46736 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
BRCC3P46736 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.75□□□□□ -0.05
BRCC3P46736 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.75□□□□□ -0.05
BRCC3P46736 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
BRCC3P46736 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
BRCC3P46736 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
BRCC3P46736 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC14.75□□□□□ -0.05
BRCC3P46736 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC14.75□□□□□ -0.05
BRCC3P46736 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCC3P46736 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCC3P46736 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.74□□□□□ -0.05
BRCC3P46736 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCC3P46736 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
BRCC3P46736 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCC3P46736 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC14.74□□□□□ -0.05
BRCC3P46736 FAM90A21P-201ENST00000510875 1396 ntBASIC14.74□□□□□ -0.05
BRCC3P46736 FAM90A15P-201ENST00000514465 1395 ntBASIC14.74□□□□□ -0.05
BRCC3P46736 FAM90A6P-201ENST00000515148 1394 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms