Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SLC1A1P43005 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 PCDHA6-201ENST00000378126 3267 ntBASIC14.63□□□□□ -0.07
SLC1A1P43005 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 KRT8P43-201ENST00000406052 1458 ntBASIC14.63□□□□□ -0.07
SLC1A1P43005 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SLC1A1P43005 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC1A1P43005 OS9-203ENST00000389142 2457 ntTSL 5 BASIC14.63□□□□□ -0.07
SLC1A1P43005 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC1A1P43005 AC245140.2-201ENST00000624054 1939 ntBASIC14.62□□□□□ -0.07
SLC1A1P43005 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC14.62□□□□□ -0.07
SLC1A1P43005 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.62□□□□□ -0.07
SLC1A1P43005 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.62□□□□□ -0.07
SLC1A1P43005 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC1A1P43005 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC1A1P43005 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SLC1A1P43005 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
SLC1A1P43005 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
SLC1A1P43005 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC1A1P43005 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC1A1P43005 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.62□□□□□ -0.07
SLC1A1P43005 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.62□□□□□ -0.07
SLC1A1P43005 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.62□□□□□ -0.07
SLC1A1P43005 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.62□□□□□ -0.07
SLC1A1P43005 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC1A1P43005 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.62□□□□□ -0.07
SLC1A1P43005 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SLC1A1P43005 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.62□□□□□ -0.07
SLC1A1P43005 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.62□□□□□ -0.07
SLC1A1P43005 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.62□□□□□ -0.07
SLC1A1P43005 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.62□□□□□ -0.07
SLC1A1P43005 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC1A1P43005 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC1A1P43005 GHET1-201ENST00000627071 1906 ntBASIC14.62□□□□□ -0.07
SLC1A1P43005 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC1A1P43005 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.62□□□□□ -0.07
SLC1A1P43005 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC1A1P43005 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SLC1A1P43005 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC1A1P43005 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC1A1P43005 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC1A1P43005 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC1A1P43005 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC1A1P43005 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC1A1P43005 NRADDP-202ENST00000641269 1585 ntBASIC14.61□□□□□ -0.07
SLC1A1P43005 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
SLC1A1P43005 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
SLC1A1P43005 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SLC1A1P43005 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SLC1A1P43005 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC1A1P43005 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
SLC1A1P43005 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC1A1P43005 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
SLC1A1P43005 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.61□□□□□ -0.07
SLC1A1P43005 NDUFB10P1-201ENST00000567319 521 ntBASIC14.61□□□□□ -0.07
SLC1A1P43005 MIR3940-201ENST00000579148 102 ntBASIC14.61□□□□□ -0.07
SLC1A1P43005 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.61□□□□□ -0.07
SLC1A1P43005 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC1A1P43005 AL021707.6-201ENST00000609212 491 ntBASIC14.61□□□□□ -0.07
SLC1A1P43005 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC1A1P43005 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC1A1P43005 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC1A1P43005 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC1A1P43005 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC1A1P43005 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC1A1P43005 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms