Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFSF9P41273 AC106827.1-201ENST00000366454 431 ntBASIC15.03■□□□□ -0
TNFSF9P41273 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC15.03■□□□□ -0
TNFSF9P41273 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.03■□□□□ -0
TNFSF9P41273 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TNFSF9P41273 AC004837.1-201ENST00000446267 564 ntBASIC15.03■□□□□ -0
TNFSF9P41273 AC018463.1-201ENST00000456674 917 ntBASIC15.03■□□□□ -0
TNFSF9P41273 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC15.03■□□□□ -0
TNFSF9P41273 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC15.03■□□□□ -0
TNFSF9P41273 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.03■□□□□ -0
TNFSF9P41273 VENTXP3-201ENST00000546480 773 ntBASIC15.03■□□□□ -0
TNFSF9P41273 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC15.03■□□□□ -0
TNFSF9P41273 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC15.03■□□□□ -0
TNFSF9P41273 JPT2-214ENST00000569765 782 ntTSL 2 BASIC15.03■□□□□ -0
TNFSF9P41273 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.03■□□□□ -0
TNFSF9P41273 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC15.03■□□□□ -0
TNFSF9P41273 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC15.03■□□□□ -0
TNFSF9P41273 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFSF9P41273 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFSF9P41273 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC15.03■□□□□ -0
TNFSF9P41273 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFSF9P41273 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TNFSF9P41273 AC245140.2-201ENST00000624054 1939 ntBASIC15.03■□□□□ -0
TNFSF9P41273 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFSF9P41273 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.03■□□□□ -0
TNFSF9P41273 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFSF9P41273 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
TNFSF9P41273 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TNFSF9P41273 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC15.03■□□□□ -0
TNFSF9P41273 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFSF9P41273 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFSF9P41273 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFSF9P41273 AF013593.1-201ENST00000458074 1487 ntBASIC15.02■□□□□ -0
TNFSF9P41273 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TNFSF9P41273 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TNFSF9P41273 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TNFSF9P41273 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.02■□□□□ -0
TNFSF9P41273 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TNFSF9P41273 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.02■□□□□ -0
TNFSF9P41273 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TNFSF9P41273 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC15.02■□□□□ -0
TNFSF9P41273 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TNFSF9P41273 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TNFSF9P41273 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.02■□□□□ -0
TNFSF9P41273 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TNFSF9P41273 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
TNFSF9P41273 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TNFSF9P41273 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TNFSF9P41273 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TNFSF9P41273 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.02■□□□□ -0
TNFSF9P41273 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TNFSF9P41273 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.02■□□□□ -0
TNFSF9P41273 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
TNFSF9P41273 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC15.02■□□□□ -0
TNFSF9P41273 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.02■□□□□ -0
TNFSF9P41273 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC15.02■□□□□ -0
TNFSF9P41273 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.02■□□□□ -0
TNFSF9P41273 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC15.02■□□□□ -0
TNFSF9P41273 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC15.02■□□□□ -0
TNFSF9P41273 AC093300.1-201ENST00000510368 1201 ntBASIC15.02■□□□□ -0
TNFSF9P41273 AC100858.1-201ENST00000514059 1228 ntBASIC15.02■□□□□ -0
TNFSF9P41273 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC15.02■□□□□ -0
TNFSF9P41273 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TNFSF9P41273 BATF-202ENST00000555504 361 ntTSL 2 BASIC15.02■□□□□ -0
TNFSF9P41273 DBP-202ENST00000593500 712 ntTSL 2 BASIC15.02■□□□□ -0
TNFSF9P41273 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
TNFSF9P41273 AP003419.4-201ENST00000616071 517 ntBASIC15.02■□□□□ -0
TNFSF9P41273 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.02■□□□□ -0
TNFSF9P41273 ST5-261ENST00000626808 1071 ntTSL 5 BASIC15.02■□□□□ -0
TNFSF9P41273 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TNFSF9P41273 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TNFSF9P41273 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TNFSF9P41273 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TNFSF9P41273 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TNFSF9P41273 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
TNFSF9P41273 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TNFSF9P41273 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.02□□□□□ -0.01
TNFSF9P41273 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TNFSF9P41273 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TNFSF9P41273 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TNFSF9P41273 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC15.02□□□□□ -0.01
TNFSF9P41273 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.02□□□□□ -0.01
TNFSF9P41273 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TNFSF9P41273 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TNFSF9P41273 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC15.02□□□□□ -0.01
TNFSF9P41273 AC020917.4-201ENST00000623994 1999 ntBASIC15.02□□□□□ -0.01
TNFSF9P41273 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC15.02□□□□□ -0.01
TNFSF9P41273 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.02□□□□□ -0.01
TNFSF9P41273 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TNFSF9P41273 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF9P41273 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TNFSF9P41273 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TNFSF9P41273 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
TNFSF9P41273 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
TNFSF9P41273 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF9P41273 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TNFSF9P41273 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF9P41273 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC15.01□□□□□ -0.01
TNFSF9P41273 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC15.01□□□□□ -0.01
TNFSF9P41273 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms