Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MDH1P40925 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MDH1P40925 DBIL5P-203ENST00000536214 2677 ntBASIC14.04□□□□□ -0.16
MDH1P40925 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MDH1P40925 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
MDH1P40925 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC14.04□□□□□ -0.16
MDH1P40925 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC14.04□□□□□ -0.16
MDH1P40925 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.04□□□□□ -0.16
MDH1P40925 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MDH1P40925 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC14.03□□□□□ -0.16
MDH1P40925 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC14.03□□□□□ -0.16
MDH1P40925 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
MDH1P40925 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
MDH1P40925 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
MDH1P40925 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC14.03□□□□□ -0.16
MDH1P40925 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.03□□□□□ -0.16
MDH1P40925 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.03□□□□□ -0.16
MDH1P40925 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.03□□□□□ -0.16
MDH1P40925 MIR3687-2-201ENST00000577708 61 ntBASIC14.03□□□□□ -0.16
MDH1P40925 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.03□□□□□ -0.16
MDH1P40925 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.03□□□□□ -0.16
MDH1P40925 MIR8072-201ENST00000614241 80 ntBASIC14.03□□□□□ -0.16
MDH1P40925 MIR3687-1-201ENST00000614492 61 ntBASIC14.03□□□□□ -0.16
MDH1P40925 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
MDH1P40925 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.03□□□□□ -0.16
MDH1P40925 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
MDH1P40925 TMBIM7P-202ENST00000641474 1516 ntBASIC14.03□□□□□ -0.16
MDH1P40925 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 AC093462.1-201ENST00000621167 1683 ntBASIC14.03□□□□□ -0.16
MDH1P40925 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC14.03□□□□□ -0.16
MDH1P40925 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC14.03□□□□□ -0.16
MDH1P40925 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
MDH1P40925 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MDH1P40925 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
MDH1P40925 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MDH1P40925 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MDH1P40925 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MDH1P40925 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MDH1P40925 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
MDH1P40925 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC14.02□□□□□ -0.16
MDH1P40925 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
MDH1P40925 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
MDH1P40925 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
MDH1P40925 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC14.02□□□□□ -0.16
MDH1P40925 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MDH1P40925 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
MDH1P40925 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MDH1P40925 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
MDH1P40925 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
MDH1P40925 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
MDH1P40925 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
MDH1P40925 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
MDH1P40925 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MDH1P40925 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.02□□□□□ -0.17
MDH1P40925 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
MDH1P40925 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
MDH1P40925 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
MDH1P40925 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.17
MDH1P40925 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MDH1P40925 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.02□□□□□ -0.17
MDH1P40925 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.02□□□□□ -0.17
MDH1P40925 AC125807.1-201ENST00000483097 614 ntBASIC14.02□□□□□ -0.17
MDH1P40925 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.02□□□□□ -0.17
MDH1P40925 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.02□□□□□ -0.17
MDH1P40925 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.02□□□□□ -0.17
MDH1P40925 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.02□□□□□ -0.17
MDH1P40925 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.02□□□□□ -0.17
MDH1P40925 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.02□□□□□ -0.17
MDH1P40925 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.02□□□□□ -0.17
MDH1P40925 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.02□□□□□ -0.17
MDH1P40925 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.02□□□□□ -0.17
MDH1P40925 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.02□□□□□ -0.17
MDH1P40925 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.02□□□□□ -0.17
MDH1P40925 AC004790.1-201ENST00000612686 536 ntBASIC14.02□□□□□ -0.17
MDH1P40925 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MDH1P40925 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms