Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.34■□□□□ 0.05
USP8P40818 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
USP8P40818 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.34■□□□□ 0.05
USP8P40818 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
USP8P40818 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC15.34■□□□□ 0.05
USP8P40818 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.34■□□□□ 0.05
USP8P40818 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.34■□□□□ 0.05
USP8P40818 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
USP8P40818 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.34■□□□□ 0.05
USP8P40818 HMGA1P1-201ENST00000415560 1062 ntBASIC15.34■□□□□ 0.05
USP8P40818 AC092580.1-201ENST00000433998 658 ntBASIC15.34■□□□□ 0.05
USP8P40818 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.34■□□□□ 0.05
USP8P40818 XBP1P1-201ENST00000436573 652 ntBASIC15.34■□□□□ 0.05
USP8P40818 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.34■□□□□ 0.05
USP8P40818 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.34■□□□□ 0.05
USP8P40818 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.34■□□□□ 0.05
USP8P40818 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.34■□□□□ 0.05
USP8P40818 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.34■□□□□ 0.05
USP8P40818 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.34■□□□□ 0.05
USP8P40818 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 AC022748.3-201ENST00000621828 275 ntBASIC15.34■□□□□ 0.05
USP8P40818 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.34■□□□□ 0.05
USP8P40818 AL805961.2-201ENST00000642139 4817 ntBASIC15.34■□□□□ 0.05
USP8P40818 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 TUBB1P2-201ENST00000422712 1306 ntBASIC15.34■□□□□ 0.05
USP8P40818 LINC00115-201ENST00000473798 1317 ntBASIC15.34■□□□□ 0.05
USP8P40818 TUBB1P1-201ENST00000503144 1300 ntBASIC15.34■□□□□ 0.05
USP8P40818 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.34■□□□□ 0.05
USP8P40818 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
USP8P40818 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
USP8P40818 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
USP8P40818 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
USP8P40818 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
USP8P40818 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.05
USP8P40818 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
USP8P40818 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC15.33■□□□□ 0.05
USP8P40818 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
USP8P40818 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
USP8P40818 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
USP8P40818 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
USP8P40818 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
USP8P40818 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.33■□□□□ 0.05
USP8P40818 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC15.33■□□□□ 0.05
USP8P40818 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
USP8P40818 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
USP8P40818 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
USP8P40818 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
USP8P40818 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
USP8P40818 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP8P40818 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP8P40818 AC004241.5-201ENST00000623870 2448 ntBASIC15.33■□□□□ 0.04
USP8P40818 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP8P40818 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC15.33■□□□□ 0.04
USP8P40818 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP8P40818 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
USP8P40818 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.33■□□□□ 0.04
USP8P40818 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP8P40818 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.33■□□□□ 0.04
USP8P40818 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
USP8P40818 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP8P40818 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.33■□□□□ 0.04
USP8P40818 RPS2P32-201ENST00000439199 892 ntBASIC15.33■□□□□ 0.04
USP8P40818 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.33■□□□□ 0.04
USP8P40818 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.33■□□□□ 0.04
USP8P40818 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.33■□□□□ 0.04
USP8P40818 AC104306.2-201ENST00000451877 341 ntBASIC15.33■□□□□ 0.04
USP8P40818 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
USP8P40818 AC106794.1-201ENST00000506935 792 ntBASIC15.33■□□□□ 0.04
USP8P40818 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.33■□□□□ 0.04
USP8P40818 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.33■□□□□ 0.04
USP8P40818 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.33■□□□□ 0.04
USP8P40818 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.33■□□□□ 0.04
USP8P40818 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.33■□□□□ 0.04
USP8P40818 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.33■□□□□ 0.04
USP8P40818 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.33■□□□□ 0.04
USP8P40818 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.33■□□□□ 0.04
USP8P40818 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
USP8P40818 AL136295.7-201ENST00000619226 1200 ntBASIC15.33■□□□□ 0.04
USP8P40818 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms