Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LTBRP36941 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LTBRP36941 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LTBRP36941 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.02□□□□□ -0.17
LTBRP36941 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.02□□□□□ -0.17
LTBRP36941 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LTBRP36941 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LTBRP36941 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
LTBRP36941 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC14.01□□□□□ -0.17
LTBRP36941 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.01□□□□□ -0.17
LTBRP36941 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LTBRP36941 AC020910.6-201ENST00000623084 1459 ntBASIC14.01□□□□□ -0.17
LTBRP36941 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LTBRP36941 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 SPTLC1P3-201ENST00000403408 259 ntBASIC14.01□□□□□ -0.17
LTBRP36941 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC14.01□□□□□ -0.17
LTBRP36941 CLK2P1-201ENST00000416636 1294 ntBASIC14.01□□□□□ -0.17
LTBRP36941 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC14.01□□□□□ -0.17
LTBRP36941 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC14.01□□□□□ -0.17
LTBRP36941 AC012066.1-201ENST00000439252 694 ntBASIC14.01□□□□□ -0.17
LTBRP36941 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 BICD1P1-201ENST00000457832 1222 ntBASIC14.01□□□□□ -0.17
LTBRP36941 CXXC1P1-202ENST00000489409 1212 ntBASIC14.01□□□□□ -0.17
LTBRP36941 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC14.01□□□□□ -0.17
LTBRP36941 FTH1-205ENST00000529631 507 ntTSL 4 BASIC14.01□□□□□ -0.17
LTBRP36941 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC14.01□□□□□ -0.17
LTBRP36941 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC14.01□□□□□ -0.17
LTBRP36941 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC14.01□□□□□ -0.17
LTBRP36941 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.01□□□□□ -0.17
LTBRP36941 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
LTBRP36941 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LTBRP36941 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LTBRP36941 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBRP36941 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LTBRP36941 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC14□□□□□ -0.17
LTBRP36941 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LTBRP36941 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
LTBRP36941 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14□□□□□ -0.17
LTBRP36941 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
LTBRP36941 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LTBRP36941 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LTBRP36941 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LTBRP36941 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LTBRP36941 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14□□□□□ -0.17
LTBRP36941 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14□□□□□ -0.17
LTBRP36941 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LTBRP36941 CD9-212ENST00000610354 1315 ntTSL 5 BASIC14□□□□□ -0.17
LTBRP36941 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14□□□□□ -0.17
LTBRP36941 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14□□□□□ -0.17
LTBRP36941 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LTBRP36941 AL391903.1-201ENST00000407513 365 ntBASIC14□□□□□ -0.17
LTBRP36941 HMGN1P4-201ENST00000419500 290 ntBASIC14□□□□□ -0.17
LTBRP36941 HLA-DQB3-203ENST00000425319 356 ntBASIC14□□□□□ -0.17
LTBRP36941 HNRNPA1P59-201ENST00000430583 918 ntBASIC14□□□□□ -0.17
LTBRP36941 AC012513.2-201ENST00000441511 1137 ntBASIC14□□□□□ -0.17
LTBRP36941 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
LTBRP36941 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC14□□□□□ -0.17
LTBRP36941 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC14□□□□□ -0.17
LTBRP36941 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC14□□□□□ -0.17
LTBRP36941 AC063924.1-201ENST00000546680 673 ntBASIC14□□□□□ -0.17
LTBRP36941 GOLGA2P10-201ENST00000550961 817 ntBASIC14□□□□□ -0.17
LTBRP36941 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC14□□□□□ -0.17
LTBRP36941 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC14□□□□□ -0.17
LTBRP36941 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC14□□□□□ -0.17
LTBRP36941 AC015818.3-201ENST00000583797 589 ntBASIC14□□□□□ -0.17
LTBRP36941 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC14□□□□□ -0.17
LTBRP36941 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC14□□□□□ -0.17
LTBRP36941 AP000553.2-201ENST00000609038 441 ntBASIC14□□□□□ -0.17
LTBRP36941 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LTBRP36941 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14□□□□□ -0.17
LTBRP36941 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LTBRP36941 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC14□□□□□ -0.17
LTBRP36941 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LTBRP36941 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC14□□□□□ -0.17
LTBRP36941 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LTBRP36941 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LTBRP36941 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
LTBRP36941 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LTBRP36941 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms