Protein–RNA interactions for Protein: P25205

MCM3, DNA replication licensing factor MCM3, humanhuman

Predictions only

Length 808 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3P25205 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MCM3P25205 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC14.85□□□□□ -0.03
MCM3P25205 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MCM3P25205 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MCM3P25205 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MCM3P25205 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MCM3P25205 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.85□□□□□ -0.03
MCM3P25205 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MCM3P25205 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MCM3P25205 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MCM3P25205 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
MCM3P25205 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MCM3P25205 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MCM3P25205 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MCM3P25205 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 AC134407.3-201ENST00000624035 2139 ntBASIC14.84□□□□□ -0.03
MCM3P25205 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
MCM3P25205 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
MCM3P25205 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
MCM3P25205 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
MCM3P25205 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC14.84□□□□□ -0.03
MCM3P25205 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
MCM3P25205 ACKR1-201ENST00000368121 1240 ntBASIC14.84□□□□□ -0.03
MCM3P25205 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
MCM3P25205 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.84□□□□□ -0.03
MCM3P25205 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.84□□□□□ -0.03
MCM3P25205 AL035414.1-201ENST00000451327 857 ntBASIC14.84□□□□□ -0.03
MCM3P25205 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.84□□□□□ -0.03
MCM3P25205 AC011495.1-201ENST00000498085 584 ntBASIC14.84□□□□□ -0.03
MCM3P25205 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.84□□□□□ -0.03
MCM3P25205 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.84□□□□□ -0.03
MCM3P25205 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.84□□□□□ -0.03
MCM3P25205 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.84□□□□□ -0.03
MCM3P25205 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC14.84□□□□□ -0.03
MCM3P25205 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 CLUHP2-201ENST00000426660 1303 ntBASIC14.84□□□□□ -0.03
MCM3P25205 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
MCM3P25205 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
MCM3P25205 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.84□□□□□ -0.03
MCM3P25205 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MCM3P25205 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC14.84□□□□□ -0.03
MCM3P25205 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
MCM3P25205 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.83□□□□□ -0.03
MCM3P25205 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC14.83□□□□□ -0.03
MCM3P25205 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
MCM3P25205 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
MCM3P25205 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
MCM3P25205 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
MCM3P25205 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
MCM3P25205 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
MCM3P25205 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC14.83□□□□□ -0.03
MCM3P25205 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MCM3P25205 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MCM3P25205 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MCM3P25205 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
MCM3P25205 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
MCM3P25205 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.83□□□□□ -0.04
MCM3P25205 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MCM3P25205 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
MCM3P25205 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MCM3P25205 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.83□□□□□ -0.04
MCM3P25205 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.83□□□□□ -0.04
MCM3P25205 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MCM3P25205 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.83□□□□□ -0.04
MCM3P25205 SSR4P1-201ENST00000415143 412 ntBASIC14.83□□□□□ -0.04
MCM3P25205 TMEM14DP-201ENST00000422205 345 ntBASIC14.83□□□□□ -0.04
MCM3P25205 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.83□□□□□ -0.04
MCM3P25205 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.83□□□□□ -0.04
MCM3P25205 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
MCM3P25205 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MCM3P25205 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.83□□□□□ -0.04
MCM3P25205 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.83□□□□□ -0.04
MCM3P25205 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.83□□□□□ -0.04
MCM3P25205 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
MCM3P25205 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MCM3P25205 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
MCM3P25205 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MCM3P25205 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms