Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 AC087045.2-201ENST00000606279 1003 ntBASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 AC018635.2-201ENST00000608625 364 ntBASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 AC005785.2-201ENST00000624655 631 ntBASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 AC090505.1-201ENST00000430515 1834 ntBASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNYL3P0C7X3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 KHSRPP1-201ENST00000427983 1768 ntBASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 AC012617.1-204ENST00000586340 2305 ntBASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 AL121578.1-201ENST00000428051 892 ntBASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 AL627422.1-201ENST00000434104 580 ntBASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 ZNF736P1Y-201ENST00000440402 1276 ntBASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 AC027237.1-201ENST00000560942 655 ntBASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 AC022148.2-201ENST00000586176 560 ntBASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 RN7SL736P-201ENST00000613111 269 ntBASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 MARK2P16-201ENST00000605714 1723 ntBASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CCNYL3P0C7X3 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 AC016397.2-201ENST00000624848 1985 ntBASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 AC011474.4-201ENST00000623523 2076 ntBASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNYL3P0C7X3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms