Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
APOC3P02656 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC3P02656 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC11.12□□□□□ -0.63
APOC3P02656 SHPRH-201ENST00000275233 6649 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC3P02656 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC3P02656 C19orf44-201ENST00000221671 3427 ntAPPRIS P3 TSL 2 BASIC11.12□□□□□ -0.63
APOC3P02656 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
APOC3P02656 ALOX5-201ENST00000374391 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC3P02656 TRAK1-206ENST00000449246 3260 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
APOC3P02656 CHID1-204ENST00000449825 3537 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
APOC3P02656 WDR82-201ENST00000296490 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC3P02656 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC3P02656 NUP62-201ENST00000352066 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC3P02656 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC3P02656 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC11.12□□□□□ -0.63
APOC3P02656 STAT6-205ENST00000543873 3119 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
APOC3P02656 PKM-222ENST00000568883 1863 ntTSL 5 BASIC11.12□□□□□ -0.63
APOC3P02656 AC134682.1-201ENST00000569285 3377 ntBASIC11.12□□□□□ -0.63
APOC3P02656 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
APOC3P02656 INSC-201ENST00000379554 2954 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC3P02656 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC3P02656 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC11.12□□□□□ -0.63
APOC3P02656 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
APOC3P02656 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC11.12□□□□□ -0.63
APOC3P02656 AC003102.2-201ENST00000589195 1469 ntBASIC11.12□□□□□ -0.63
APOC3P02656 ZNF627-201ENST00000361113 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC3P02656 TSPYL2-201ENST00000375442 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC3P02656 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
APOC3P02656 GRM4-205ENST00000538487 4153 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
APOC3P02656 HDGFL3-201ENST00000299633 12733 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC3P02656 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC3P02656 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 SALL2-207ENST00000614342 4942 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC11.11□□□□□ -0.63
APOC3P02656 CDC42BPA-202ENST00000366764 10445 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 PCDH20-201ENST00000409204 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 DCK-204ENST00000504952 2614 ntTSL 3 BASIC11.11□□□□□ -0.63
APOC3P02656 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC11.11□□□□□ -0.63
APOC3P02656 AC068473.3-202ENST00000589723 4167 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 SLIT2-201ENST00000273739 5132 ntTSL 5 BASIC11.11□□□□□ -0.63
APOC3P02656 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 ZNF423-207ENST00000567169 4017 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
APOC3P02656 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC11.11□□□□□ -0.63
APOC3P02656 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
APOC3P02656 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
APOC3P02656 AL158070.2-201ENST00000623713 1621 ntBASIC11.11□□□□□ -0.63
APOC3P02656 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
APOC3P02656 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
APOC3P02656 AC140658.5-201ENST00000438532 169 ntBASIC11.11□□□□□ -0.63
APOC3P02656 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC11.11□□□□□ -0.63
APOC3P02656 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC11.11□□□□□ -0.63
APOC3P02656 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
APOC3P02656 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC11.11□□□□□ -0.63
APOC3P02656 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC11.11□□□□□ -0.63
APOC3P02656 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
APOC3P02656 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC11.11□□□□□ -0.63
APOC3P02656 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
APOC3P02656 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC11.11□□□□□ -0.63
APOC3P02656 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
APOC3P02656 AC104506.1-201ENST00000609247 429 ntBASIC11.11□□□□□ -0.63
APOC3P02656 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
APOC3P02656 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC11.11□□□□□ -0.63
APOC3P02656 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 SPATA6-203ENST00000371847 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 AC092802.1-201ENST00000421762 2447 ntTSL 2 BASIC11.11□□□□□ -0.63
APOC3P02656 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 PNMA6F-201ENST00000436629 3348 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
APOC3P02656 CDC14A-201ENST00000336454 4137 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 AC005154.3-201ENST00000419639 1393 ntBASIC11.11□□□□□ -0.63
APOC3P02656 LINC02133-202ENST00000569726 2626 ntTSL 2 BASIC11.11□□□□□ -0.63
APOC3P02656 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC11.11□□□□□ -0.63
APOC3P02656 LINC01134-203ENST00000442673 3059 ntTSL 2 BASIC11.11□□□□□ -0.63
APOC3P02656 USP10-219ENST00000570191 2717 ntTSL 2 BASIC11.11□□□□□ -0.63
APOC3P02656 NUMB-212ENST00000554546 3607 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 AC104590.1-202ENST00000558368 1921 ntBASIC11.11□□□□□ -0.63
APOC3P02656 DCT-202ENST00000446125 2395 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 TBCEL-202ENST00000422003 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 ARHGEF10-203ENST00000398560 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 S1PR3-201ENST00000358157 4206 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 AC037459.3-201ENST00000521025 2750 ntBASIC11.11□□□□□ -0.63
APOC3P02656 USHBP1-201ENST00000252597 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC3P02656 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
APOC3P02656 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms