Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD248Q9HCU0 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.83□□□□□ -0.04
CD248Q9HCU0 OR2K2-202ENST00000374428 1038 ntBASIC14.83□□□□□ -0.04
CD248Q9HCU0 KRT18P36-201ENST00000411618 1276 ntBASIC14.83□□□□□ -0.04
CD248Q9HCU0 XBP1P1-201ENST00000436573 652 ntBASIC14.83□□□□□ -0.04
CD248Q9HCU0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD248Q9HCU0 TPT1P11-201ENST00000458482 498 ntBASIC14.83□□□□□ -0.04
CD248Q9HCU0 RN7SL258P-201ENST00000478664 300 ntBASIC14.83□□□□□ -0.04
CD248Q9HCU0 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD248Q9HCU0 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.83□□□□□ -0.04
CD248Q9HCU0 PARP8-206ENST00000503665 572 ntTSL 4 BASIC14.83□□□□□ -0.04
CD248Q9HCU0 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD248Q9HCU0 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CD248Q9HCU0 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.83□□□□□ -0.04
CD248Q9HCU0 RN7SL555P-201ENST00000584742 339 ntBASIC14.83□□□□□ -0.04
CD248Q9HCU0 U62317.3-201ENST00000608319 855 ntBASIC14.83□□□□□ -0.04
CD248Q9HCU0 MIR6727-201ENST00000620702 65 ntBASIC14.83□□□□□ -0.04
CD248Q9HCU0 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.83□□□□□ -0.04
CD248Q9HCU0 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD248Q9HCU0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD248Q9HCU0 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD248Q9HCU0 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CD248Q9HCU0 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD248Q9HCU0 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD248Q9HCU0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD248Q9HCU0 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CD248Q9HCU0 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CD248Q9HCU0 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD248Q9HCU0 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD248Q9HCU0 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CD248Q9HCU0 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD248Q9HCU0 TBC1D3J-201ENST00000620719 1426 ntBASIC14.83□□□□□ -0.04
CD248Q9HCU0 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD248Q9HCU0 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD248Q9HCU0 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC14.82□□□□□ -0.04
CD248Q9HCU0 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.82□□□□□ -0.04
CD248Q9HCU0 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
CD248Q9HCU0 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.82□□□□□ -0.04
CD248Q9HCU0 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.82□□□□□ -0.04
CD248Q9HCU0 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.82□□□□□ -0.04
CD248Q9HCU0 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CD248Q9HCU0 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CD248Q9HCU0 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CD248Q9HCU0 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CD248Q9HCU0 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CD248Q9HCU0 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.82□□□□□ -0.04
CD248Q9HCU0 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.82□□□□□ -0.04
CD248Q9HCU0 POU5F1P2-201ENST00000521750 823 ntBASIC14.82□□□□□ -0.04
CD248Q9HCU0 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.82□□□□□ -0.04
CD248Q9HCU0 AC133540.1-201ENST00000620845 1019 ntBASIC14.82□□□□□ -0.04
CD248Q9HCU0 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CD248Q9HCU0 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CD248Q9HCU0 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CD248Q9HCU0 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC14.82□□□□□ -0.04
CD248Q9HCU0 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CD248Q9HCU0 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CD248Q9HCU0 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD248Q9HCU0 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD248Q9HCU0 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.81□□□□□ -0.04
CD248Q9HCU0 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.81□□□□□ -0.04
CD248Q9HCU0 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CD248Q9HCU0 AC015819.3-201ENST00000624305 2674 ntBASIC14.81□□□□□ -0.04
CD248Q9HCU0 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD248Q9HCU0 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD248Q9HCU0 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD248Q9HCU0 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC14.81□□□□□ -0.04
CD248Q9HCU0 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC14.81□□□□□ -0.04
CD248Q9HCU0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD248Q9HCU0 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD248Q9HCU0 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD248Q9HCU0 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD248Q9HCU0 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CD248Q9HCU0 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD248Q9HCU0 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CD248Q9HCU0 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD248Q9HCU0 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD248Q9HCU0 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms