Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 AP002353.1-201ENST00000528257 1599 ntBASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 CROCCP4-201ENST00000457096 498 ntBASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 MIR3197-201ENST00000582241 73 ntBASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 AC020917.4-201ENST00000623994 1999 ntBASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 AL805961.2-201ENST00000642139 4817 ntBASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 MSNP1-201ENST00000511640 1732 ntBASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
POLR2J2Q9GZM3 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 LINC01815-202ENST00000641468 1409 ntBASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 LINC00115-201ENST00000473798 1317 ntBASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 YBX1P6-201ENST00000442962 1002 ntBASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.98□□□□□ -0.33
POLR2J2Q9GZM3 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms