Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 AMT-256ENST00000638063 1783 ntTSL 5 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 AL035696.2-201ENST00000407941 709 ntBASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 BX679664.3-201ENST00000414070 555 ntBASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 KRT17P4-201ENST00000429445 819 ntBASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 EEF1DP2-201ENST00000433698 843 ntBASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 GRPEL2P1-201ENST00000453145 339 ntBASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 AC113935.1-201ENST00000471722 555 ntBASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 RN7SL818P-201ENST00000485099 259 ntBASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 CD81-209ENST00000492627 886 ntTSL 3 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 REEP5-205ENST00000504247 480 ntTSL 5 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 AC100858.1-201ENST00000514059 1228 ntBASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 KRT18P37-201ENST00000520711 1282 ntBASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 AL359219.1-201ENST00000556311 934 ntBASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 RN7SL556P-201ENST00000582856 298 ntBASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 HKR1-225ENST00000592168 566 ntTSL 4 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 RN7SL725P-201ENST00000606439 259 ntBASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 AC083964.1-201ENST00000607549 630 ntBASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 AL157392.4-201ENST00000609756 345 ntBASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 AC084782.3-201ENST00000612282 578 ntBASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 BAP1-211ENST00000615113 489 ntBASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 AL451007.2-201ENST00000632004 563 ntBASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC4.74□□□□□ -1.65
KRTAP4-3Q9BYR4 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms