Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 HNRNPA1P25-201ENST00000422644 937 ntBASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 AC104961.1-201ENST00000427605 771 ntBASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 IGHEP1-201ENST00000521393 651 ntBASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 CTBP2P6-201ENST00000526402 1229 ntBASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 EMC4-208ENST00000559078 599 ntTSL 3 BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 AC145285.5-201ENST00000562217 361 ntBASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 AC106881.1-201ENST00000605849 3329 ntBASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RP1L1Q8IWN7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 BX679664.3-201ENST00000414070 555 ntBASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 AC004522.1-201ENST00000419978 654 ntBASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 AC113935.1-201ENST00000471722 555 ntBASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 KRT8P2-201ENST00000556193 944 ntBASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 PCDHGB6-201ENST00000520790 4599 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 OR10N1P-201ENST00000392758 869 ntBASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 AL512599.1-201ENST00000430724 685 ntBASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 NRADDP-201ENST00000437305 691 ntBASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 GOLGA6L16P-201ENST00000441780 1299 ntBASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 URB1-AS1-201ENST00000534991 831 ntBASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 SRP14-208ENST00000560773 468 ntTSL 3 BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 AL591471.1-201ENST00000621855 229 ntBASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
RP1L1Q8IWN7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms