RNA–Protein interactions for RNA: ENST00000520790.1

PCDHGB6-201, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB6, Length 4,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-201ENST00000520790 DCAF8L2P0C7V8 631 aa22.95■■□□□ 1.26
PCDHGB6-201ENST00000520790 NISCHQ9Y2I1 1504 aa22.28■■□□□ 1.16
PCDHGB6-201ENST00000520790 SHROOM4Q9ULL8 1493 aa20.73■□□□□ 0.91
PCDHGB6-201ENST00000520790 SUPT5HO00267 1087 aaKnown RBP20.53■□□□□ 0.88
PCDHGB6-201ENST00000520790 ABCC9O60706 1549 aa20.34■□□□□ 0.85
PCDHGB6-201ENST00000520790 PABPN1Q86U42 306 aaKnown RBP eCLIP20.02■□□□□ 0.8
PCDHGB6-201ENST00000520790 EHMT2Q96KQ7 1210 aa19.88■□□□□ 0.77
PCDHGB6-201ENST00000520790 FAM9AQ8IZU1 332 aaPredicted RBP19.44■□□□□ 0.7
PCDHGB6-201ENST00000520790 RANGAP1P46060 587 aaPredicted RBP19.39■□□□□ 0.69
PCDHGB6-201ENST00000520790 TTBK1Q5TCY1 1321 aaPredicted RBP19.22■□□□□ 0.67
PCDHGB6-201ENST00000520790 ATP1B4Q9UN42 357 aaPredicted RBP19.18■□□□□ 0.66
PCDHGB6-201ENST00000520790 APLP2Q06481 763 aa19.03■□□□□ 0.64
PCDHGB6-201ENST00000520790 TRIM41Q8WV44 630 aa19■□□□□ 0.63
PCDHGB6-201ENST00000520790 FBLN2P98095 1184 aa18.96■□□□□ 0.63
PCDHGB6-201ENST00000520790 UBTFP17480 764 aaKnown RBP18.86■□□□□ 0.61
PCDHGB6-201ENST00000520790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.85■□□□□ 0.61
PCDHGB6-201ENST00000520790 HNRNPUL2Q1KMD3 747 aaKnown RBP18.85■□□□□ 0.61
PCDHGB6-201ENST00000520790 MYT1LQ9UL68 1186 aa18.78■□□□□ 0.6
PCDHGB6-201ENST00000520790 SCRIBQ14160 1630 aa18.72■□□□□ 0.59
PCDHGB6-201ENST00000520790 RB1CC1Q8TDY2 1594 aa18.57■□□□□ 0.56
PCDHGB6-201ENST00000520790 CCDC180Q9P1Z9 1646 aa18.48■□□□□ 0.55
PCDHGB6-201ENST00000520790 CHIC1Q5VXU3 224 aa18.41■□□□□ 0.54
PCDHGB6-201ENST00000520790 ZCCHC6Q5VYS8 1495 aaKnown RBP18.25■□□□□ 0.51
PCDHGB6-201ENST00000520790 NACADO15069 1562 aa18.25■□□□□ 0.51
PCDHGB6-201ENST00000520790 ARID3CA6NKF2 412 aa18.25■□□□□ 0.51
PCDHGB6-201ENST00000520790 ERCC6Q03468 1493 aa18.22■□□□□ 0.51
PCDHGB6-201ENST00000520790 NPM1P06748 294 aaKnown RBP eCLIP18.2■□□□□ 0.5
PCDHGB6-201ENST00000520790 PPARGC1BQ86YN6 1023 aaKnown RBP18.16■□□□□ 0.5
PCDHGB6-201ENST00000520790 CHMP7Q8WUX9 453 aaPredicted RBP18.13■□□□□ 0.49
PCDHGB6-201ENST00000520790 ITGAEP38570 1179 aa18.12■□□□□ 0.49
PCDHGB6-201ENST00000520790 PLPPR3Q6T4P5 718 aa18.11■□□□□ 0.49
PCDHGB6-201ENST00000520790 P3H3Q8IVL6 736 aa18.11■□□□□ 0.49
PCDHGB6-201ENST00000520790 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
PCDHGB6-201ENST00000520790 CECR2Q9BXF3 1484 aa17.93■□□□□ 0.46
PCDHGB6-201ENST00000520790 BAZ1BQ9UIG0 1483 aaKnown RBP17.91■□□□□ 0.46
PCDHGB6-201ENST00000520790 LOC105371045A0A1W2PR82 267 aa17.89■□□□□ 0.45
PCDHGB6-201ENST00000520790 PCGF6Q9BYE7 350 aa17.87■□□□□ 0.45
PCDHGB6-201ENST00000520790 ESF1Q9H501 851 aaKnown RBP17.84■□□□□ 0.45
PCDHGB6-201ENST00000520790 ZNF777Q9ULD5 760 aaPredicted RBP17.79■□□□□ 0.44
PCDHGB6-201ENST00000520790 DNAJC5BQ9UF47 199 aa17.79■□□□□ 0.44
PCDHGB6-201ENST00000520790 BCANQ96GW7 911 aa17.73■□□□□ 0.43
PCDHGB6-201ENST00000520790 FAM50AQ14320 339 aaKnown RBP17.72■□□□□ 0.43
PCDHGB6-201ENST00000520790 KCNH8Q96L42 1107 aa17.72■□□□□ 0.43
PCDHGB6-201ENST00000520790 CSRNP3Q8WYN3 585 aa17.71■□□□□ 0.42
PCDHGB6-201ENST00000520790 CDK11AQ9UQ88 783 aaPredicted RBP17.66■□□□□ 0.42
PCDHGB6-201ENST00000520790 PDS5BQ9NTI5 1447 aa17.6■□□□□ 0.41
PCDHGB6-201ENST00000520790 RSF1Q96T23 1441 aaPredicted RBP17.58■□□□□ 0.4
PCDHGB6-201ENST00000520790 ARID4BQ4LE39 1312 aaPredicted RBP17.57■□□□□ 0.4
PCDHGB6-201ENST00000520790 TRIM52Q96A61 297 aa17.56■□□□□ 0.4
PCDHGB6-201ENST00000520790 DCAF1Q9Y4B6 1507 aa17.55■□□□□ 0.4
PCDHGB6-201ENST00000520790 CCER1Q8TC90 406 aaPredicted RBP17.55■□□□□ 0.4
PCDHGB6-201ENST00000520790 CYB5RLQ6IPT4 315 aa17.55■□□□□ 0.4
PCDHGB6-201ENST00000520790 POLR3GLQ9BT43 218 aa17.54■□□□□ 0.4
PCDHGB6-201ENST00000520790 SLC4A1APQ9BWU0 796 aaKnown RBP17.54■□□□□ 0.4
PCDHGB6-201ENST00000520790 BAZ1AQ9NRL2 1556 aaPredicted RBP17.51■□□□□ 0.39
PCDHGB6-201ENST00000520790 STAG3Q9UJ98 1225 aa17.48■□□□□ 0.39
PCDHGB6-201ENST00000520790 OSCARQ8IYS5 282 aa17.46■□□□□ 0.39
PCDHGB6-201ENST00000520790 TDRD9Q8NDG6 1382 aaKnown RBP17.43■□□□□ 0.38
PCDHGB6-201ENST00000520790 CHGAP10645 457 aaKnown RBP17.42■□□□□ 0.38
PCDHGB6-201ENST00000520790 CNGB1Q14028 1251 aaPredicted RBP17.4■□□□□ 0.38
PCDHGB6-201ENST00000520790 CADPSQ9ULU8 1353 aa17.38■□□□□ 0.37
PCDHGB6-201ENST00000520790 PLEKHD1A6NEE1 506 aa17.37■□□□□ 0.37
PCDHGB6-201ENST00000520790 SMARCA2P51531 1590 aa17.36■□□□□ 0.37
PCDHGB6-201ENST00000520790 AEBP2Q6ZN18 517 aaPredicted RBP17.35■□□□□ 0.37
PCDHGB6-201ENST00000520790 SENP3Q9H4L4 574 aaPredicted RBP17.32■□□□□ 0.36
PCDHGB6-201ENST00000520790 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.32■□□□□ 0.36
PCDHGB6-201ENST00000520790 ZNF326Q5BKZ1 582 aaKnown RBP17.31■□□□□ 0.36
PCDHGB6-201ENST00000520790 WRNQ14191 1432 aaPredicted RBP eCLIP17.31■□□□□ 0.36
PCDHGB6-201ENST00000520790 MROH2BQ7Z745 1585 aa17.31■□□□□ 0.36
PCDHGB6-201ENST00000520790 ATAD2BQ9ULI0 1458 aa17.29■□□□□ 0.36
PCDHGB6-201ENST00000520790 MLECQ14165 292 aa17.29■□□□□ 0.36
PCDHGB6-201ENST00000520790 MYO15BQ96JP2 1530 aa17.25■□□□□ 0.35
PCDHGB6-201ENST00000520790 SOGA1O94964 1423 aa17.25■□□□□ 0.35
PCDHGB6-201ENST00000520790 TSPY4P0CV99 314 aa17.24■□□□□ 0.35
PCDHGB6-201ENST00000520790 TSPY10P0CW01 314 aa17.24■□□□□ 0.35
PCDHGB6-201ENST00000520790 CHIC2Q9UKJ5 165 aa17.21■□□□□ 0.35
PCDHGB6-201ENST00000520790 KIF27Q86VH2 1401 aa17.2■□□□□ 0.34
PCDHGB6-201ENST00000520790 CUX2O14529 1486 aa17.19■□□□□ 0.34
PCDHGB6-201ENST00000520790 CEP164Q9UPV0 1460 aa17.19■□□□□ 0.34
PCDHGB6-201ENST00000520790 EIF4G1Q04637 1599 aaKnown RBP17.18■□□□□ 0.34
PCDHGB6-201ENST00000520790 NEUROD1Q13562 356 aa17.14■□□□□ 0.33
PCDHGB6-201ENST00000520790 MTUS2Q5JR59 1369 aa17.13■□□□□ 0.33
PCDHGB6-201ENST00000520790 CCDC88BA6NC98 1476 aa17.12■□□□□ 0.33
PCDHGB6-201ENST00000520790 C14orf37Q86TY3 774 aa17.12■□□□□ 0.33
PCDHGB6-201ENST00000520790 PLEKHG5O94827 1062 aa17.11■□□□□ 0.33
PCDHGB6-201ENST00000520790 FANCD2Q9BXW9 1451 aa17.1■□□□□ 0.33
PCDHGB6-201ENST00000520790 JPH4Q96JJ6 628 aa17.09■□□□□ 0.33
PCDHGB6-201ENST00000520790 CARMIL1Q5VZK9 1371 aa17.08■□□□□ 0.32
PCDHGB6-201ENST00000520790 CC2D2AQ9P2K1 1620 aa17.07■□□□□ 0.32
PCDHGB6-201ENST00000520790 SCAF1Q9H7N4 1312 aaKnown RBP17.07■□□□□ 0.32
PCDHGB6-201ENST00000520790 PPP1R15AO75807 674 aaPredicted RBP17.05■□□□□ 0.32
PCDHGB6-201ENST00000520790 CFDP1Q9UEE9 299 aaPredicted RBP17.04■□□□□ 0.32
PCDHGB6-201ENST00000520790 NESP48681 1621 aa17.02■□□□□ 0.31
PCDHGB6-201ENST00000520790 NCAPD3P42695 1498 aa16.99■□□□□ 0.31
PCDHGB6-201ENST00000520790 TRIM26Q12899 539 aaPredicted RBP16.98■□□□□ 0.31
PCDHGB6-201ENST00000520790 CARMIL2Q6F5E8 1435 aa16.98■□□□□ 0.31
PCDHGB6-201ENST00000520790 FAM69CQ0P6D2 419 aa16.98■□□□□ 0.31
PCDHGB6-201ENST00000520790 WIZO95785 1651 aa16.94■□□□□ 0.3
PCDHGB6-201ENST00000520790 SMARCA4P51532 1647 aa16.93■□□□□ 0.3
PCDHGB6-201ENST00000520790 PELP1Q8IZL8 1130 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms