Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 AL133499.1-201ENST00000596207 608 ntBASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 FAM90A12P-201ENST00000519497 2375 ntBASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 FAM90A24P-201ENST00000520792 2369 ntBASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 AC073869.1-201ENST00000415574 2762 ntBASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.1□□□□□ -0.15
LYSMD3Q7Z3D4 AC008620.2-201ENST00000510294 1569 ntBASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 AC234782.1-201ENST00000451950 919 ntBASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 MIR3907-201ENST00000579424 151 ntBASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 SIGLEC18P-201ENST00000602271 909 ntBASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 OR13I1P-201ENST00000609811 1264 ntBASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD3Q7Z3D4 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LYSMD3Q7Z3D4 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
LYSMD3Q7Z3D4 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LYSMD3Q7Z3D4 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LYSMD3Q7Z3D4 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LYSMD3Q7Z3D4 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.08□□□□□ -0.15
LYSMD3Q7Z3D4 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.08□□□□□ -0.15
LYSMD3Q7Z3D4 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LYSMD3Q7Z3D4 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD3Q7Z3D4 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms