Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CTC1Q2NKJ3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CTC1Q2NKJ3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CTC1Q2NKJ3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.93□□□□□ -0.02
CTC1Q2NKJ3 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CTC1Q2NKJ3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.93□□□□□ -0.02
CTC1Q2NKJ3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.93□□□□□ -0.02
CTC1Q2NKJ3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
CTC1Q2NKJ3 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CTC1Q2NKJ3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CTC1Q2NKJ3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
CTC1Q2NKJ3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.93□□□□□ -0.02
CTC1Q2NKJ3 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CTC1Q2NKJ3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CTC1Q2NKJ3 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.93□□□□□ -0.02
CTC1Q2NKJ3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CTC1Q2NKJ3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CTC1Q2NKJ3 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CTC1Q2NKJ3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 CTSL-202ENST00000342020 933 ntTSL 2 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 HNRNPA1P42-201ENST00000458678 957 ntBASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 RN7SL128P-201ENST00000467883 305 ntBASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 CHCHD2P2-201ENST00000503744 321 ntBASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 AC005740.1-201ENST00000515639 522 ntBASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 AC023968.2-201ENST00000560593 1049 ntBASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 AL590235.1-201ENST00000564650 861 ntBASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 KRT8P24-201ENST00000560290 1559 ntBASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.92□□□□□ -0.02
CTC1Q2NKJ3 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTC1Q2NKJ3 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CTC1Q2NKJ3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CTC1Q2NKJ3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTC1Q2NKJ3 AL354702.1-201ENST00000442006 1960 ntBASIC14.91□□□□□ -0.02
CTC1Q2NKJ3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTC1Q2NKJ3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTC1Q2NKJ3 RN7SL832P-201ENST00000607781 1756 ntBASIC14.91□□□□□ -0.02
CTC1Q2NKJ3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CTC1Q2NKJ3 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTC1Q2NKJ3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTC1Q2NKJ3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CTC1Q2NKJ3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTC1Q2NKJ3 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CTC1Q2NKJ3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.91□□□□□ -0.02
CTC1Q2NKJ3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTC1Q2NKJ3 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTC1Q2NKJ3 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTC1Q2NKJ3 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTC1Q2NKJ3 GEMIN8P4-201ENST00000380526 729 ntBASIC14.91□□□□□ -0.02
CTC1Q2NKJ3 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms