Protein–RNA interactions for Protein: Q0D2K0

NIPAL4, Magnesium transporter NIPA4, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL4Q0D2K0 DUTP3-201ENST00000450025 415 ntBASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 SIGLEC18P-201ENST00000602271 909 ntBASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 CU633904.3-201ENST00000624042 1029 ntBASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 TBC1D3J-201ENST00000620719 1426 ntBASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 MIR497HG-202ENST00000572453 3838 ntBASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL4Q0D2K0 AC125807.2-201ENST00000513358 3514 ntBASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 BEND3P3-201ENST00000611030 2440 ntBASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 AL583805.1-201ENST00000391389 531 ntBASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 AL133466.1-201ENST00000447582 150 ntBASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 AP000358.1-201ENST00000456260 156 ntBASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 AL021578.1-201ENST00000613646 709 ntBASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 AC009560.1-201ENST00000620208 434 ntBASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 AC091812.3-201ENST00000621362 345 ntBASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL4Q0D2K0 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.21□□□□□ -0.14
NIPAL4Q0D2K0 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NIPAL4Q0D2K0 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.21□□□□□ -0.14
NIPAL4Q0D2K0 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NIPAL4Q0D2K0 PTENP1-202ENST00000532280 3996 ntBASIC14.21□□□□□ -0.14
NIPAL4Q0D2K0 MSNP1-201ENST00000511640 1732 ntBASIC14.21□□□□□ -0.14
NIPAL4Q0D2K0 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
NIPAL4Q0D2K0 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NIPAL4Q0D2K0 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NIPAL4Q0D2K0 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NIPAL4Q0D2K0 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NIPAL4Q0D2K0 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.21□□□□□ -0.14
NIPAL4Q0D2K0 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
NIPAL4Q0D2K0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
NIPAL4Q0D2K0 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL4Q0D2K0 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL4Q0D2K0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
NIPAL4Q0D2K0 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.2□□□□□ -0.14
NIPAL4Q0D2K0 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.2□□□□□ -0.14
NIPAL4Q0D2K0 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL4Q0D2K0 AC004554.1-201ENST00000422830 1468 ntBASIC14.2□□□□□ -0.14
NIPAL4Q0D2K0 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL4Q0D2K0 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
NIPAL4Q0D2K0 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL4Q0D2K0 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NIPAL4Q0D2K0 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.2□□□□□ -0.14
NIPAL4Q0D2K0 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL4Q0D2K0 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NIPAL4Q0D2K0 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms