Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.23□□□□□ -0.29
RAE1P78406 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.23□□□□□ -0.29
RAE1P78406 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.23□□□□□ -0.29
RAE1P78406 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.23□□□□□ -0.29
RAE1P78406 AC040160.2-201ENST00000623816 1675 ntBASIC13.23□□□□□ -0.29
RAE1P78406 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAE1P78406 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RAE1P78406 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RAE1P78406 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAE1P78406 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAE1P78406 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAE1P78406 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAE1P78406 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RAE1P78406 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.23□□□□□ -0.29
RAE1P78406 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAE1P78406 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RAE1P78406 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.23□□□□□ -0.29
RAE1P78406 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAE1P78406 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAE1P78406 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAE1P78406 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RAE1P78406 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAE1P78406 AC024075.2-201ENST00000598112 1473 ntBASIC13.23□□□□□ -0.29
RAE1P78406 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RAE1P78406 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.22□□□□□ -0.29
RAE1P78406 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAE1P78406 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAE1P78406 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAE1P78406 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAE1P78406 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAE1P78406 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAE1P78406 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RAE1P78406 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC13.22□□□□□ -0.29
RAE1P78406 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAE1P78406 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAE1P78406 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAE1P78406 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAE1P78406 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RAE1P78406 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAE1P78406 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAE1P78406 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAE1P78406 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
RAE1P78406 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.22□□□□□ -0.29
RAE1P78406 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
RAE1P78406 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
RAE1P78406 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAE1P78406 MIR1247-201ENST00000408206 136 ntBASIC13.22□□□□□ -0.29
RAE1P78406 AL008707.1-201ENST00000422498 534 ntBASIC13.22□□□□□ -0.29
RAE1P78406 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.22□□□□□ -0.29
RAE1P78406 FNTAP2-201ENST00000430308 634 ntBASIC13.22□□□□□ -0.29
RAE1P78406 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAE1P78406 AC092658.1-201ENST00000505836 891 ntBASIC13.22□□□□□ -0.29
RAE1P78406 POU5F1P2-201ENST00000521750 823 ntBASIC13.22□□□□□ -0.29
RAE1P78406 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAE1P78406 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RAE1P78406 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
RAE1P78406 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC13.22□□□□□ -0.29
RAE1P78406 LINC01783-202ENST00000614408 828 ntBASIC13.22□□□□□ -0.29
RAE1P78406 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.22□□□□□ -0.29
RAE1P78406 AC091544.8-201ENST00000619490 361 ntBASIC13.22□□□□□ -0.29
RAE1P78406 BX284668.2-205ENST00000619677 828 ntBASIC13.22□□□□□ -0.29
RAE1P78406 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.22□□□□□ -0.29
RAE1P78406 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.22□□□□□ -0.29
RAE1P78406 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAE1P78406 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAE1P78406 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAE1P78406 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
RAE1P78406 AC010970.1-201ENST00000445125 1848 ntBASIC13.22□□□□□ -0.29
RAE1P78406 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.22□□□□□ -0.29
RAE1P78406 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAE1P78406 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RAE1P78406 AC138028.6-201ENST00000616106 1482 ntBASIC13.22□□□□□ -0.29
RAE1P78406 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.22□□□□□ -0.29
RAE1P78406 PES1P2-201ENST00000449745 1735 ntBASIC13.22□□□□□ -0.29
RAE1P78406 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAE1P78406 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAE1P78406 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
RAE1P78406 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
RAE1P78406 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAE1P78406 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.21□□□□□ -0.29
RAE1P78406 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAE1P78406 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAE1P78406 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAE1P78406 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.21□□□□□ -0.29
RAE1P78406 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.21□□□□□ -0.29
RAE1P78406 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
RAE1P78406 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC13.21□□□□□ -0.29
RAE1P78406 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.21□□□□□ -0.29
RAE1P78406 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAE1P78406 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAE1P78406 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAE1P78406 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAE1P78406 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
RAE1P78406 AP000437.1-201ENST00000624057 2085 ntBASIC13.21□□□□□ -0.29
RAE1P78406 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAE1P78406 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAE1P78406 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
RAE1P78406 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAE1P78406 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
RAE1P78406 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms