Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
ZC3H6P61129 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC18.33■□□□□ 0.52
ZC3H6P61129 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
ZC3H6P61129 SDCBP2P1-201ENST00000416115 614 ntBASIC18.33■□□□□ 0.52
ZC3H6P61129 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZC3H6P61129 AC005077.3-201ENST00000449614 213 ntBASIC18.33■□□□□ 0.52
ZC3H6P61129 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC18.33■□□□□ 0.52
ZC3H6P61129 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC18.33■□□□□ 0.52
ZC3H6P61129 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC18.33■□□□□ 0.52
ZC3H6P61129 IFNL3P1-201ENST00000595082 501 ntBASIC18.33■□□□□ 0.52
ZC3H6P61129 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC18.33■□□□□ 0.52
ZC3H6P61129 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZC3H6P61129 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZC3H6P61129 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.33■□□□□ 0.52
ZC3H6P61129 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZC3H6P61129 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZC3H6P61129 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC18.33■□□□□ 0.52
ZC3H6P61129 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC18.33■□□□□ 0.52
ZC3H6P61129 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ZC3H6P61129 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
ZC3H6P61129 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZC3H6P61129 HSPA7-201ENST00000445535 1927 ntBASIC18.33■□□□□ 0.52
ZC3H6P61129 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZC3H6P61129 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZC3H6P61129 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZC3H6P61129 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.33■□□□□ 0.52
ZC3H6P61129 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZC3H6P61129 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC18.33■□□□□ 0.52
ZC3H6P61129 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZC3H6P61129 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H6P61129 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H6P61129 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H6P61129 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H6P61129 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H6P61129 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H6P61129 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H6P61129 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H6P61129 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H6P61129 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H6P61129 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H6P61129 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H6P61129 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H6P61129 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H6P61129 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ZC3H6P61129 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC18.32■□□□□ 0.52
ZC3H6P61129 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ZC3H6P61129 TUBB4AP1-201ENST00000450755 1325 ntBASIC18.32■□□□□ 0.52
ZC3H6P61129 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ZC3H6P61129 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ZC3H6P61129 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H6P61129 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC18.32■□□□□ 0.52
ZC3H6P61129 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H6P61129 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC18.32■□□□□ 0.52
ZC3H6P61129 ASS1P1-201ENST00000402854 1237 ntBASIC18.32■□□□□ 0.52
ZC3H6P61129 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC18.32■□□□□ 0.52
ZC3H6P61129 AC000077.1-201ENST00000420012 953 ntBASIC18.32■□□□□ 0.52
ZC3H6P61129 HNRNPA1P25-201ENST00000422644 937 ntBASIC18.32■□□□□ 0.52
ZC3H6P61129 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC18.32■□□□□ 0.52
ZC3H6P61129 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H6P61129 HLA-W-207ENST00000439514 771 ntBASIC18.32■□□□□ 0.52
ZC3H6P61129 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC18.32■□□□□ 0.52
ZC3H6P61129 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC18.32■□□□□ 0.52
ZC3H6P61129 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC18.32■□□□□ 0.52
ZC3H6P61129 AC142086.5-202ENST00000562500 217 ntBASIC18.32■□□□□ 0.52
ZC3H6P61129 CLPP-205ENST00000596605 646 ntTSL 2 BASIC18.32■□□□□ 0.52
ZC3H6P61129 AC254633.1-201ENST00000606790 345 ntBASIC18.32■□□□□ 0.52
ZC3H6P61129 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC18.32■□□□□ 0.52
ZC3H6P61129 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H6P61129 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H6P61129 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC18.32■□□□□ 0.52
ZC3H6P61129 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H6P61129 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ZC3H6P61129 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H6P61129 RCC2P5-201ENST00000492126 1487 ntBASIC18.32■□□□□ 0.52
ZC3H6P61129 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H6P61129 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ZC3H6P61129 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ZC3H6P61129 TKT-201ENST00000296289 1931 ntTSL 5 BASIC18.31■□□□□ 0.52
ZC3H6P61129 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZC3H6P61129 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZC3H6P61129 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZC3H6P61129 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZC3H6P61129 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC18.31■□□□□ 0.52
ZC3H6P61129 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZC3H6P61129 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ZC3H6P61129 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZC3H6P61129 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC18.31■□□□□ 0.52
ZC3H6P61129 UGT1A12P-201ENST00000447084 853 ntBASIC18.31■□□□□ 0.52
ZC3H6P61129 RN7SL846P-201ENST00000467429 292 ntBASIC18.31■□□□□ 0.52
ZC3H6P61129 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC18.31■□□□□ 0.52
ZC3H6P61129 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC18.31■□□□□ 0.52
ZC3H6P61129 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
ZC3H6P61129 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZC3H6P61129 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC18.31■□□□□ 0.52
ZC3H6P61129 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZC3H6P61129 AC061965.1-201ENST00000560524 1465 ntBASIC18.31■□□□□ 0.52
ZC3H6P61129 OS9-207ENST00000439210 1946 ntTSL 2 BASIC18.31■□□□□ 0.52
ZC3H6P61129 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZC3H6P61129 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZC3H6P61129 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms