Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
BRCA2P51587 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC14.99□□□□□ -0.01
BRCA2P51587 AC027277.1-201ENST00000535363 533 ntTSL 3 BASIC14.99□□□□□ -0.01
BRCA2P51587 IGHV3OR16-11-201ENST00000565524 349 ntBASIC14.99□□□□□ -0.01
BRCA2P51587 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.99□□□□□ -0.01
BRCA2P51587 FAM231B-201ENST00000600179 510 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
BRCA2P51587 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC14.99□□□□□ -0.01
BRCA2P51587 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.99□□□□□ -0.01
BRCA2P51587 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BRCA2P51587 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BRCA2P51587 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
BRCA2P51587 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
BRCA2P51587 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.99□□□□□ -0.01
BRCA2P51587 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BRCA2P51587 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.99□□□□□ -0.01
BRCA2P51587 DIS3L2P1-201ENST00000509197 559 ntBASIC14.99□□□□□ -0.01
BRCA2P51587 AC005154.1-202ENST00000578293 999 ntTSL 5 BASIC14.99□□□□□ -0.01
BRCA2P51587 AP001180.4-201ENST00000584167 823 ntTSL 3 BASIC14.99□□□□□ -0.01
BRCA2P51587 RN7SL827P-201ENST00000607480 288 ntBASIC14.99□□□□□ -0.01
BRCA2P51587 AC009118.3-201ENST00000622896 873 ntBASIC14.99□□□□□ -0.01
BRCA2P51587 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BRCA2P51587 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.99□□□□□ -0.01
BRCA2P51587 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
BRCA2P51587 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.99□□□□□ -0.01
BRCA2P51587 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
BRCA2P51587 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BRCA2P51587 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BRCA2P51587 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BRCA2P51587 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
BRCA2P51587 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BRCA2P51587 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
BRCA2P51587 AC010997.1-201ENST00000447646 350 ntBASIC14.99□□□□□ -0.01
BRCA2P51587 AL391822.1-201ENST00000452580 562 ntBASIC14.99□□□□□ -0.01
BRCA2P51587 NUP210P2-201ENST00000510577 282 ntBASIC14.99□□□□□ -0.01
BRCA2P51587 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC14.99□□□□□ -0.01
BRCA2P51587 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC14.99□□□□□ -0.01
BRCA2P51587 CALM3-206ENST00000594523 540 ntTSL 4 BASIC14.99□□□□□ -0.01
BRCA2P51587 AC108002.3-201ENST00000612629 503 ntTSL 2 BASIC14.99□□□□□ -0.01
BRCA2P51587 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC14.99□□□□□ -0.01
BRCA2P51587 TBC1D3P1-201ENST00000590047 1693 ntBASIC14.99□□□□□ -0.01
BRCA2P51587 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BRCA2P51587 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BRCA2P51587 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BRCA2P51587 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BRCA2P51587 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
BRCA2P51587 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BRCA2P51587 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
BRCA2P51587 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRCA2P51587 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRCA2P51587 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
BRCA2P51587 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRCA2P51587 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRCA2P51587 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC14.98□□□□□ -0.01
BRCA2P51587 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
BRCA2P51587 ELOBP2-201ENST00000526184 355 ntBASIC14.98□□□□□ -0.01
BRCA2P51587 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC14.98□□□□□ -0.01
BRCA2P51587 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC14.98□□□□□ -0.01
BRCA2P51587 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC14.98□□□□□ -0.01
BRCA2P51587 RN7SL750P-201ENST00000582814 238 ntBASIC14.98□□□□□ -0.01
BRCA2P51587 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC14.98□□□□□ -0.01
BRCA2P51587 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC14.98□□□□□ -0.01
BRCA2P51587 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRCA2P51587 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC14.98□□□□□ -0.01
BRCA2P51587 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.98□□□□□ -0.01
BRCA2P51587 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRCA2P51587 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.98□□□□□ -0.01
BRCA2P51587 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BRCA2P51587 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRCA2P51587 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BRCA2P51587 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRCA2P51587 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
BRCA2P51587 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRCA2P51587 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRCA2P51587 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
BRCA2P51587 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC14.98□□□□□ -0.01
BRCA2P51587 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BRCA2P51587 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC14.98□□□□□ -0.01
BRCA2P51587 AL109954.3-201ENST00000615088 558 ntBASIC14.98□□□□□ -0.01
BRCA2P51587 AC138430.2-201ENST00000624068 504 ntBASIC14.98□□□□□ -0.01
BRCA2P51587 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRCA2P51587 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.98□□□□□ -0.01
BRCA2P51587 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRCA2P51587 AC093462.1-201ENST00000621167 1683 ntBASIC14.98□□□□□ -0.01
BRCA2P51587 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRCA2P51587 AC104640.1-201ENST00000562617 2109 ntBASIC14.98□□□□□ -0.01
BRCA2P51587 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.98□□□□□ -0.01
BRCA2P51587 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRCA2P51587 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRCA2P51587 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRCA2P51587 RN7SL148P-201ENST00000467120 279 ntBASIC14.98□□□□□ -0.01
BRCA2P51587 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.98□□□□□ -0.01
BRCA2P51587 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC14.98□□□□□ -0.01
BRCA2P51587 AC007336.3-201ENST00000623886 2160 ntBASIC14.97□□□□□ -0.01
BRCA2P51587 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BRCA2P51587 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
BRCA2P51587 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRCA2P51587 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
BRCA2P51587 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRCA2P51587 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
BRCA2P51587 PDZD9-201ENST00000424898 1260 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms