Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC19.03■□□□□ 0.64
CPS1P31327 SNORA50.1-201ENST00000628590 135 ntBASIC19.03■□□□□ 0.64
CPS1P31327 AC011239.2-201ENST00000624820 1489 ntBASIC19.03■□□□□ 0.64
CPS1P31327 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPS1P31327 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPS1P31327 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPS1P31327 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CPS1P31327 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC19.03■□□□□ 0.64
CPS1P31327 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CPS1P31327 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPS1P31327 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPS1P31327 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CPS1P31327 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC19.03■□□□□ 0.64
CPS1P31327 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CPS1P31327 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CPS1P31327 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.64
CPS1P31327 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CPS1P31327 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CPS1P31327 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPS1P31327 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPS1P31327 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPS1P31327 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CPS1P31327 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC19.02■□□□□ 0.64
CPS1P31327 AC012100.1-201ENST00000470304 282 ntBASIC19.02■□□□□ 0.64
CPS1P31327 AC010395.2-201ENST00000509899 904 ntBASIC19.02■□□□□ 0.64
CPS1P31327 SAA2-206ENST00000530400 323 ntTSL 3 BASIC19.02■□□□□ 0.64
CPS1P31327 AC004923.4-201ENST00000532296 739 ntTSL 3 BASIC19.02■□□□□ 0.64
CPS1P31327 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CPS1P31327 AC089987.3-201ENST00000551847 588 ntTSL 4 BASIC19.02■□□□□ 0.64
CPS1P31327 KRT18P8-201ENST00000581937 1246 ntBASIC19.02■□□□□ 0.64
CPS1P31327 MED25-209ENST00000612791 881 ntTSL 5 BASIC19.02■□□□□ 0.64
CPS1P31327 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CPS1P31327 KRT8P24-201ENST00000560290 1559 ntBASIC19.02■□□□□ 0.64
CPS1P31327 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CPS1P31327 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPS1P31327 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CPS1P31327 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC19.02■□□□□ 0.63
CPS1P31327 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CPS1P31327 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
CPS1P31327 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CPS1P31327 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPS1P31327 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPS1P31327 LINC00552-201ENST00000625151 2579 ntBASIC19.01■□□□□ 0.63
CPS1P31327 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CPS1P31327 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC19.01■□□□□ 0.63
CPS1P31327 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPS1P31327 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC19.01■□□□□ 0.63
CPS1P31327 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPS1P31327 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPS1P31327 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CPS1P31327 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC19.01■□□□□ 0.63
CPS1P31327 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC19.01■□□□□ 0.63
CPS1P31327 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CPS1P31327 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPS1P31327 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPS1P31327 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPS1P31327 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPS1P31327 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC19.01■□□□□ 0.63
CPS1P31327 GAPDHP65-201ENST00000425487 1006 ntBASIC19.01■□□□□ 0.63
CPS1P31327 PRDX2P3-201ENST00000515779 586 ntBASIC19.01■□□□□ 0.63
CPS1P31327 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC19.01■□□□□ 0.63
CPS1P31327 AC044839.1-201ENST00000532307 541 ntTSL 5 BASIC19.01■□□□□ 0.63
CPS1P31327 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC19.01■□□□□ 0.63
CPS1P31327 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC19.01■□□□□ 0.63
CPS1P31327 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC19.01■□□□□ 0.63
CPS1P31327 AC131274.3-201ENST00000578745 1271 ntBASIC19.01■□□□□ 0.63
CPS1P31327 CALM3-206ENST00000594523 540 ntTSL 4 BASIC19.01■□□□□ 0.63
CPS1P31327 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC19.01■□□□□ 0.63
CPS1P31327 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC19.01■□□□□ 0.63
CPS1P31327 AC244097.1-201ENST00000621631 1216 ntBASIC19.01■□□□□ 0.63
CPS1P31327 MIR941-1-201ENST00000636396 72 ntBASIC19.01■□□□□ 0.63
CPS1P31327 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPS1P31327 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CPS1P31327 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPS1P31327 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPS1P31327 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC19.01■□□□□ 0.63
CPS1P31327 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPS1P31327 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CPS1P31327 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPS1P31327 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPS1P31327 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC19.01■□□□□ 0.63
CPS1P31327 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPS1P31327 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CPS1P31327 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPS1P31327 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CPS1P31327 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPS1P31327 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPS1P31327 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPS1P31327 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPS1P31327 IGLV2-33-201ENST00000390302 412 ntAPPRIS P1 BASIC19■□□□□ 0.63
CPS1P31327 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC19■□□□□ 0.63
CPS1P31327 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC19■□□□□ 0.63
CPS1P31327 RN7SL789P-201ENST00000478944 293 ntBASIC19■□□□□ 0.63
CPS1P31327 CXXC1P1-202ENST00000489409 1212 ntBASIC19■□□□□ 0.63
CPS1P31327 AC067942.2-201ENST00000506227 1268 ntBASIC19■□□□□ 0.63
CPS1P31327 AC010442.2-201ENST00000509301 407 ntBASIC19■□□□□ 0.63
CPS1P31327 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPS1P31327 PTS-204ENST00000525803 625 ntTSL 3 BASIC19■□□□□ 0.63
CPS1P31327 AP001979.1-201ENST00000529222 751 ntBASIC19■□□□□ 0.63
CPS1P31327 AP000553.2-201ENST00000609038 441 ntBASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms