Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC15.29■□□□□ 0.04
CTGFP29279 HNRNPA1P73-201ENST00000446472 928 ntBASIC15.29■□□□□ 0.04
CTGFP29279 AC069421.1-201ENST00000447462 323 ntBASIC15.29■□□□□ 0.04
CTGFP29279 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC15.29■□□□□ 0.04
CTGFP29279 HNRNPA1P72-201ENST00000529511 967 ntBASIC15.29■□□□□ 0.04
CTGFP29279 HNRNPA1P11-201ENST00000580106 956 ntBASIC15.29■□□□□ 0.04
CTGFP29279 AC092535.4-201ENST00000609548 397 ntBASIC15.29■□□□□ 0.04
CTGFP29279 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CTGFP29279 AL928654.5-201ENST00000624831 2501 ntBASIC15.29■□□□□ 0.04
CTGFP29279 INTS4P1-203ENST00000641008 3683 ntBASIC15.29■□□□□ 0.04
CTGFP29279 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTGFP29279 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.29■□□□□ 0.04
CTGFP29279 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.29■□□□□ 0.04
CTGFP29279 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.29■□□□□ 0.04
CTGFP29279 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTGFP29279 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CTGFP29279 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTGFP29279 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CTGFP29279 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTGFP29279 DDC-212ENST00000615193 1674 ntTSL 3 BASIC15.28■□□□□ 0.04
CTGFP29279 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CTGFP29279 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTGFP29279 AL157832.2-205ENST00000597245 1649 ntBASIC15.28■□□□□ 0.04
CTGFP29279 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTGFP29279 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTGFP29279 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTGFP29279 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC15.28■□□□□ 0.04
CTGFP29279 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CTGFP29279 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTGFP29279 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTGFP29279 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CTGFP29279 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC15.28■□□□□ 0.04
CTGFP29279 AC010997.1-201ENST00000447646 350 ntBASIC15.28■□□□□ 0.04
CTGFP29279 BICD1P1-201ENST00000457832 1222 ntBASIC15.28■□□□□ 0.04
CTGFP29279 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTGFP29279 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC15.28■□□□□ 0.04
CTGFP29279 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC15.28■□□□□ 0.04
CTGFP29279 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC15.28■□□□□ 0.04
CTGFP29279 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC15.28■□□□□ 0.04
CTGFP29279 MIR4526-201ENST00000583168 87 ntBASIC15.28■□□□□ 0.04
CTGFP29279 AC006273.1-201ENST00000606966 861 ntBASIC15.28■□□□□ 0.04
CTGFP29279 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC15.28■□□□□ 0.04
CTGFP29279 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC15.28■□□□□ 0.04
CTGFP29279 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC15.28■□□□□ 0.04
CTGFP29279 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTGFP29279 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTGFP29279 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTGFP29279 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTGFP29279 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CTGFP29279 TP73-207ENST00000378290 1831 ntTSL 2 BASIC15.28■□□□□ 0.04
CTGFP29279 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTGFP29279 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CTGFP29279 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTGFP29279 NME1-209ENST00000511355 1645 ntTSL 5 BASIC15.28■□□□□ 0.04
CTGFP29279 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
CTGFP29279 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTGFP29279 ERG-211ENST00000453032 1595 ntTSL 2 BASIC15.28■□□□□ 0.04
CTGFP29279 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTGFP29279 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTGFP29279 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CTGFP29279 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTGFP29279 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.27■□□□□ 0.04
CTGFP29279 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTGFP29279 TUBA3GP-201ENST00000410028 1325 ntBASIC15.27■□□□□ 0.04
CTGFP29279 CD9-212ENST00000610354 1315 ntTSL 5 BASIC15.27■□□□□ 0.04
CTGFP29279 AC124319.4-201ENST00000622931 2161 ntBASIC15.27■□□□□ 0.04
CTGFP29279 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CTGFP29279 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
CTGFP29279 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC15.27■□□□□ 0.04
CTGFP29279 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC15.27■□□□□ 0.04
CTGFP29279 RPSAP61-201ENST00000412542 878 ntBASIC15.27■□□□□ 0.04
CTGFP29279 AC079325.1-201ENST00000430386 857 ntBASIC15.27■□□□□ 0.04
CTGFP29279 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC15.27■□□□□ 0.04
CTGFP29279 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTGFP29279 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC15.27■□□□□ 0.04
CTGFP29279 AC015818.3-201ENST00000583797 589 ntBASIC15.27■□□□□ 0.04
CTGFP29279 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC15.27■□□□□ 0.04
CTGFP29279 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC15.27■□□□□ 0.04
CTGFP29279 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTGFP29279 AC010503.4-201ENST00000615487 688 ntBASIC15.27■□□□□ 0.04
CTGFP29279 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC15.27■□□□□ 0.04
CTGFP29279 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC15.27■□□□□ 0.04
CTGFP29279 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC15.27■□□□□ 0.04
CTGFP29279 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTGFP29279 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTGFP29279 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTGFP29279 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
CTGFP29279 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTGFP29279 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTGFP29279 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.27■□□□□ 0.03
CTGFP29279 PXK-210ENST00000479241 2817 ntTSL 2 BASIC15.27■□□□□ 0.03
CTGFP29279 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTGFP29279 KRT8P24-201ENST00000560290 1559 ntBASIC15.27■□□□□ 0.03
CTGFP29279 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC15.27■□□□□ 0.03
CTGFP29279 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTGFP29279 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC15.27■□□□□ 0.03
CTGFP29279 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CTGFP29279 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTGFP29279 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
CTGFP29279 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms