Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
VARSP26640 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
VARSP26640 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VARSP26640 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC13.9□□□□□ -0.18
VARSP26640 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
VARSP26640 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.9□□□□□ -0.18
VARSP26640 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 AC004899.1-201ENST00000424687 1714 ntBASIC13.9□□□□□ -0.18
VARSP26640 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.9□□□□□ -0.18
VARSP26640 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
VARSP26640 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
VARSP26640 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.9□□□□□ -0.18
VARSP26640 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.9□□□□□ -0.18
VARSP26640 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
VARSP26640 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.9□□□□□ -0.18
VARSP26640 KRT18P36-201ENST00000411618 1276 ntBASIC13.9□□□□□ -0.18
VARSP26640 HSFY1P1-201ENST00000423928 1178 ntBASIC13.9□□□□□ -0.18
VARSP26640 AC253536.4-201ENST00000440539 267 ntBASIC13.9□□□□□ -0.18
VARSP26640 FTLP1-201ENST00000449155 526 ntBASIC13.9□□□□□ -0.18
VARSP26640 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.9□□□□□ -0.18
VARSP26640 SERPINA13P-202ENST00000478994 924 ntBASIC13.9□□□□□ -0.18
VARSP26640 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.9□□□□□ -0.18
VARSP26640 HIST2H2BC-201ENST00000498492 580 ntBASIC13.9□□□□□ -0.18
VARSP26640 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.9□□□□□ -0.18
VARSP26640 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.9□□□□□ -0.18
VARSP26640 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC13.9□□□□□ -0.18
VARSP26640 PGAM1P5-201ENST00000548011 764 ntBASIC13.9□□□□□ -0.18
VARSP26640 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.9□□□□□ -0.18
VARSP26640 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.9□□□□□ -0.18
VARSP26640 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.9□□□□□ -0.18
VARSP26640 AC005324.6-201ENST00000587972 613 ntBASIC13.9□□□□□ -0.18
VARSP26640 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.9□□□□□ -0.18
VARSP26640 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.9□□□□□ -0.18
VARSP26640 BNIP3P13-201ENST00000599968 566 ntBASIC13.9□□□□□ -0.18
VARSP26640 AC105148.1-201ENST00000604961 409 ntBASIC13.9□□□□□ -0.18
VARSP26640 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.9□□□□□ -0.18
VARSP26640 AC022748.3-201ENST00000621828 275 ntBASIC13.9□□□□□ -0.18
VARSP26640 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.9□□□□□ -0.18
VARSP26640 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.9□□□□□ -0.18
VARSP26640 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
VARSP26640 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.9□□□□□ -0.18
VARSP26640 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
VARSP26640 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
VARSP26640 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
VARSP26640 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
VARSP26640 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VARSP26640 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
VARSP26640 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.9□□□□□ -0.19
VARSP26640 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
VARSP26640 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.89□□□□□ -0.19
VARSP26640 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.89□□□□□ -0.19
VARSP26640 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
VARSP26640 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.89□□□□□ -0.19
VARSP26640 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.89□□□□□ -0.19
VARSP26640 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.89□□□□□ -0.19
VARSP26640 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13.89□□□□□ -0.19
VARSP26640 FAM90A7P-201ENST00000382628 1395 ntBASIC13.89□□□□□ -0.19
VARSP26640 FAM90A23P-201ENST00000400136 1395 ntBASIC13.89□□□□□ -0.19
VARSP26640 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VARSP26640 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.89□□□□□ -0.19
VARSP26640 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms