Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC13.12□□□□□ -0.31
NR4A1P22736 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A1P22736 AC110048.1-201ENST00000604293 2157 ntBASIC13.12□□□□□ -0.31
NR4A1P22736 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A1P22736 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
NR4A1P22736 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A1P22736 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.12□□□□□ -0.31
NR4A1P22736 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
NR4A1P22736 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
NR4A1P22736 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
NR4A1P22736 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A1P22736 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A1P22736 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A1P22736 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A1P22736 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A1P22736 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A1P22736 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A1P22736 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A1P22736 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A1P22736 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.12□□□□□ -0.31
NR4A1P22736 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A1P22736 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A1P22736 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A1P22736 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
NR4A1P22736 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A1P22736 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC13.12□□□□□ -0.31
NR4A1P22736 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.11□□□□□ -0.31
NR4A1P22736 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NR4A1P22736 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC13.11□□□□□ -0.31
NR4A1P22736 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC13.11□□□□□ -0.31
NR4A1P22736 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NR4A1P22736 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NR4A1P22736 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.11□□□□□ -0.31
NR4A1P22736 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 AC073335.2-201ENST00000610177 3441 ntBASIC13.11□□□□□ -0.31
NR4A1P22736 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.11□□□□□ -0.31
NR4A1P22736 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC13.11□□□□□ -0.31
NR4A1P22736 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
NR4A1P22736 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
NR4A1P22736 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.11□□□□□ -0.31
NR4A1P22736 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.11□□□□□ -0.31
NR4A1P22736 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.11□□□□□ -0.31
NR4A1P22736 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.11□□□□□ -0.31
NR4A1P22736 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 CTBP2P5-201ENST00000454986 1264 ntBASIC13.11□□□□□ -0.31
NR4A1P22736 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.11□□□□□ -0.31
NR4A1P22736 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
NR4A1P22736 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.11□□□□□ -0.31
NR4A1P22736 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.11□□□□□ -0.31
NR4A1P22736 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.11□□□□□ -0.31
NR4A1P22736 AP000812.2-201ENST00000538934 718 ntBASIC13.11□□□□□ -0.31
NR4A1P22736 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.11□□□□□ -0.31
NR4A1P22736 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.11□□□□□ -0.31
NR4A1P22736 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.11□□□□□ -0.31
NR4A1P22736 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.11□□□□□ -0.31
NR4A1P22736 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.11□□□□□ -0.31
NR4A1P22736 MIR6775-201ENST00000617557 69 ntBASIC13.11□□□□□ -0.31
NR4A1P22736 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 SALL4P5-201ENST00000419001 1760 ntBASIC13.11□□□□□ -0.31
NR4A1P22736 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.11□□□□□ -0.31
NR4A1P22736 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
NR4A1P22736 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NR4A1P22736 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NR4A1P22736 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.11□□□□□ -0.31
NR4A1P22736 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NR4A1P22736 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 AL805961.2-201ENST00000642139 4817 ntBASIC13.11□□□□□ -0.31
NR4A1P22736 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
NR4A1P22736 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.11□□□□□ -0.31
NR4A1P22736 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A1P22736 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NR4A1P22736 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NR4A1P22736 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.11□□□□□ -0.31
NR4A1P22736 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 AC104758.3-203ENST00000562938 2123 ntBASIC13.1□□□□□ -0.31
NR4A1P22736 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms