Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC14.61□□□□□ -0.07
RB1P06400 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC14.61□□□□□ -0.07
RB1P06400 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC14.61□□□□□ -0.07
RB1P06400 AC005746.3-201ENST00000614751 393 ntBASIC14.61□□□□□ -0.07
RB1P06400 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
RB1P06400 AC233280.19-201ENST00000633223 136 ntBASIC14.61□□□□□ -0.07
RB1P06400 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.61□□□□□ -0.07
RB1P06400 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RB1P06400 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RB1P06400 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.61□□□□□ -0.07
RB1P06400 RCC2P1-201ENST00000452257 1476 ntBASIC14.61□□□□□ -0.07
RB1P06400 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RB1P06400 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RB1P06400 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RB1P06400 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.61□□□□□ -0.07
RB1P06400 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
RB1P06400 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.61□□□□□ -0.07
RB1P06400 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RB1P06400 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
RB1P06400 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.61□□□□□ -0.07
RB1P06400 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.61□□□□□ -0.07
RB1P06400 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RB1P06400 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RB1P06400 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
RB1P06400 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RB1P06400 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RB1P06400 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RB1P06400 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC14.6□□□□□ -0.07
RB1P06400 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.6□□□□□ -0.07
RB1P06400 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RB1P06400 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
RB1P06400 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
RB1P06400 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RB1P06400 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RB1P06400 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RB1P06400 KRT8P38-201ENST00000441370 1430 ntBASIC14.6□□□□□ -0.07
RB1P06400 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
RB1P06400 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.6□□□□□ -0.07
RB1P06400 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RB1P06400 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RB1P06400 AL390755.1-201ENST00000623716 2027 ntBASIC14.6□□□□□ -0.07
RB1P06400 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RB1P06400 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RB1P06400 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RB1P06400 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RB1P06400 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RB1P06400 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RB1P06400 SNORD88B-201ENST00000408454 91 ntBASIC14.6□□□□□ -0.07
RB1P06400 RN7SKP212-201ENST00000410851 328 ntBASIC14.6□□□□□ -0.07
RB1P06400 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RB1P06400 AC000077.1-201ENST00000420012 953 ntBASIC14.6□□□□□ -0.07
RB1P06400 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC14.6□□□□□ -0.07
RB1P06400 CDK4P1-201ENST00000454213 828 ntBASIC14.6□□□□□ -0.07
RB1P06400 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC14.6□□□□□ -0.07
RB1P06400 AC093700.1-201ENST00000503348 717 ntBASIC14.6□□□□□ -0.07
RB1P06400 RNA5SP420-201ENST00000516997 137 ntBASIC14.6□□□□□ -0.07
RB1P06400 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC14.6□□□□□ -0.07
RB1P06400 PMEL-214ENST00000550447 901 ntTSL 3 BASIC14.6□□□□□ -0.07
RB1P06400 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC14.6□□□□□ -0.07
RB1P06400 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC14.6□□□□□ -0.07
RB1P06400 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RB1P06400 PRR20FP-201ENST00000603320 180 ntBASIC14.6□□□□□ -0.07
RB1P06400 BX322562.1-201ENST00000617004 561 ntBASIC14.6□□□□□ -0.07
RB1P06400 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC14.6□□□□□ -0.07
RB1P06400 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC14.6□□□□□ -0.07
RB1P06400 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC14.6□□□□□ -0.07
RB1P06400 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC14.6□□□□□ -0.07
RB1P06400 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RB1P06400 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.6□□□□□ -0.07
RB1P06400 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RB1P06400 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RB1P06400 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RB1P06400 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.6□□□□□ -0.07
RB1P06400 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
RB1P06400 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RB1P06400 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
RB1P06400 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RB1P06400 OR2I1P-210ENST00000642037 4691 ntBASIC14.6□□□□□ -0.07
RB1P06400 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RB1P06400 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RB1P06400 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RB1P06400 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
RB1P06400 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
RB1P06400 KRT8P42-201ENST00000405771 1399 ntBASIC14.6□□□□□ -0.07
RB1P06400 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RB1P06400 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RB1P06400 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RB1P06400 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.59□□□□□ -0.07
RB1P06400 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RB1P06400 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
RB1P06400 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RB1P06400 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RB1P06400 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RB1P06400 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RB1P06400 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RB1P06400 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC14.59□□□□□ -0.07
RB1P06400 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC14.59□□□□□ -0.07
RB1P06400 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RB1P06400 AL121949.3-201ENST00000406684 385 ntBASIC14.59□□□□□ -0.07
RB1P06400 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms