Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
TRGV3P03979 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV3P03979 AC061965.1-201ENST00000560524 1465 ntBASIC11.07□□□□□ -0.64
TRGV3P03979 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC11.07□□□□□ -0.64
TRGV3P03979 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC11.07□□□□□ -0.64
TRGV3P03979 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV3P03979 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC11.07□□□□□ -0.64
TRGV3P03979 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
TRGV3P03979 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV3P03979 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
TRGV3P03979 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV3P03979 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
TRGV3P03979 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
TRGV3P03979 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
TRGV3P03979 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC11.07□□□□□ -0.64
TRGV3P03979 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC11.07□□□□□ -0.64
TRGV3P03979 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV3P03979 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV3P03979 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV3P03979 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
TRGV3P03979 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV3P03979 MAPK10-262ENST00000641051 5738 ntBASIC11.07□□□□□ -0.64
TRGV3P03979 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV3P03979 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC11.07□□□□□ -0.64
TRGV3P03979 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
TRGV3P03979 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC11.07□□□□□ -0.64
TRGV3P03979 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
TRGV3P03979 BAX-205ENST00000391871 687 ntTSL 5 BASIC11.07□□□□□ -0.64
TRGV3P03979 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV3P03979 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC11.07□□□□□ -0.64
TRGV3P03979 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV3P03979 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.07□□□□□ -0.64
TRGV3P03979 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC11.07□□□□□ -0.64
TRGV3P03979 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC11.07□□□□□ -0.64
TRGV3P03979 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC11.07□□□□□ -0.64
TRGV3P03979 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC11.07□□□□□ -0.64
TRGV3P03979 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC11.07□□□□□ -0.64
TRGV3P03979 AL109837.1-201ENST00000603272 613 ntBASIC11.07□□□□□ -0.64
TRGV3P03979 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC11.07□□□□□ -0.64
TRGV3P03979 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC11.07□□□□□ -0.64
TRGV3P03979 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV3P03979 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC11.07□□□□□ -0.64
TRGV3P03979 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
TRGV3P03979 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
TRGV3P03979 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.07□□□□□ -0.64
TRGV3P03979 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV3P03979 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC11.07□□□□□ -0.64
TRGV3P03979 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV3P03979 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV3P03979 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
TRGV3P03979 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV3P03979 SHMT1P1-201ENST00000419974 1312 ntBASIC11.07□□□□□ -0.64
TRGV3P03979 AC111170.3-201ENST00000624282 2464 ntBASIC11.07□□□□□ -0.64
TRGV3P03979 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
TRGV3P03979 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV3P03979 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV3P03979 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC11.06□□□□□ -0.64
TRGV3P03979 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
TRGV3P03979 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
TRGV3P03979 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 LSS-211ENST00000522411 2523 ntTSL 2 BASIC11.06□□□□□ -0.64
TRGV3P03979 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC11.06□□□□□ -0.64
TRGV3P03979 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
TRGV3P03979 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 AC090114.2-201ENST00000608477 7054 ntBASIC11.06□□□□□ -0.64
TRGV3P03979 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC11.06□□□□□ -0.64
TRGV3P03979 AL133338.1-201ENST00000565695 1517 ntBASIC11.06□□□□□ -0.64
TRGV3P03979 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.06□□□□□ -0.64
TRGV3P03979 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 BANF1P3-201ENST00000412556 261 ntBASIC11.06□□□□□ -0.64
TRGV3P03979 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC11.06□□□□□ -0.64
TRGV3P03979 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC11.06□□□□□ -0.64
TRGV3P03979 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 OR8T1P-201ENST00000421347 918 ntBASIC11.06□□□□□ -0.64
TRGV3P03979 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC11.06□□□□□ -0.64
TRGV3P03979 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRGV3P03979 AC026320.2-201ENST00000434379 478 ntBASIC11.06□□□□□ -0.64
TRGV3P03979 AK2P2-201ENST00000439142 405 ntBASIC11.06□□□□□ -0.64
TRGV3P03979 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC11.06□□□□□ -0.64
TRGV3P03979 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC11.06□□□□□ -0.64
TRGV3P03979 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms