Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 MANEA-AS1-201ENST00000564541 2268 ntBASIC12□□□□□ -0.49
TMEM235A6NFC5 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12□□□□□ -0.49
TMEM235A6NFC5 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TMEM235A6NFC5 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
TMEM235A6NFC5 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 AC015819.3-201ENST00000624305 2674 ntBASIC12□□□□□ -0.49
TMEM235A6NFC5 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12□□□□□ -0.49
TMEM235A6NFC5 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
TMEM235A6NFC5 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12□□□□□ -0.49
TMEM235A6NFC5 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 ZBTB12BP-201ENST00000314232 1122 ntBASIC12□□□□□ -0.49
TMEM235A6NFC5 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12□□□□□ -0.49
TMEM235A6NFC5 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12□□□□□ -0.49
TMEM235A6NFC5 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
TMEM235A6NFC5 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
TMEM235A6NFC5 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12□□□□□ -0.49
TMEM235A6NFC5 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12□□□□□ -0.49
TMEM235A6NFC5 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12□□□□□ -0.49
TMEM235A6NFC5 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12□□□□□ -0.49
TMEM235A6NFC5 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TMEM235A6NFC5 AP001889.1-201ENST00000525414 633 ntBASIC12□□□□□ -0.49
TMEM235A6NFC5 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12□□□□□ -0.49
TMEM235A6NFC5 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12□□□□□ -0.49
TMEM235A6NFC5 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12□□□□□ -0.49
TMEM235A6NFC5 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12□□□□□ -0.49
TMEM235A6NFC5 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12□□□□□ -0.49
TMEM235A6NFC5 AC124068.2-201ENST00000569473 1109 ntBASIC12□□□□□ -0.49
TMEM235A6NFC5 AC140912.1-201ENST00000577171 1054 ntBASIC12□□□□□ -0.49
TMEM235A6NFC5 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12□□□□□ -0.49
TMEM235A6NFC5 AC132192.2-201ENST00000596206 1147 ntBASIC12□□□□□ -0.49
TMEM235A6NFC5 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12□□□□□ -0.49
TMEM235A6NFC5 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12□□□□□ -0.49
TMEM235A6NFC5 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 AC107375.1-201ENST00000564464 2231 ntBASIC12□□□□□ -0.49
TMEM235A6NFC5 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
TMEM235A6NFC5 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12□□□□□ -0.49
TMEM235A6NFC5 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
TMEM235A6NFC5 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12□□□□□ -0.49
TMEM235A6NFC5 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
TMEM235A6NFC5 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
TMEM235A6NFC5 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12□□□□□ -0.49
TMEM235A6NFC5 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12□□□□□ -0.49
TMEM235A6NFC5 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TMEM235A6NFC5 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM235A6NFC5 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12□□□□□ -0.49
TMEM235A6NFC5 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
TMEM235A6NFC5 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM235A6NFC5 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM235A6NFC5 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC11.99□□□□□ -0.49
TMEM235A6NFC5 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
TMEM235A6NFC5 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms