Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 AC107375.1-201ENST00000564464 2231 ntBASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 MANEA-AS1-201ENST00000564541 2268 ntBASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 AC092933.1-201ENST00000393644 945 ntBASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 PIN1P1-201ENST00000412108 996 ntBASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 GOLGA2P8-201ENST00000505201 779 ntBASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 AC078819.1-201ENST00000547454 765 ntBASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 AC012085.1-201ENST00000548270 765 ntBASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 MAX-218ENST00000557746 571 ntTSL 4 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 RPL28-206ENST00000558752 671 ntTSL 3 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 LINC02560-201ENST00000596379 459 ntBASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 LARP4-220ENST00000615080 856 ntTSL 5 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 LINC00115-201ENST00000473798 1317 ntBASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2D4Q9Y2X8 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 STX3-207ENST00000633708 3111 ntTSL 5 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 VENTXP1-201ENST00000569334 2716 ntBASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 AC244394.1-201ENST00000435000 1665 ntBASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 GOLGA2P5-201ENST00000266746 2395 ntBASIC9.78□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms