Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 ACTBP14-201ENST00000411655 1089 ntBASIC13.85□□□□□ -0.19
NCDNQ9UBB6 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 LINP1-201ENST00000417112 917 ntTSL 2 BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 RN7SL173P-201ENST00000461853 292 ntBASIC13.85□□□□□ -0.19
NCDNQ9UBB6 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 GOLGA2P8-201ENST00000505201 779 ntBASIC13.85□□□□□ -0.19
NCDNQ9UBB6 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 AC005586.2-201ENST00000563946 837 ntBASIC13.85□□□□□ -0.19
NCDNQ9UBB6 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 SHMT1P1-201ENST00000419974 1312 ntBASIC13.85□□□□□ -0.19
NCDNQ9UBB6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
NCDNQ9UBB6 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 RPL18AP15-201ENST00000430258 517 ntBASIC13.84□□□□□ -0.19
NCDNQ9UBB6 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 NALT1-202ENST00000450304 437 ntTSL 3 BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 AC011431.1-201ENST00000512971 230 ntBASIC13.84□□□□□ -0.19
NCDNQ9UBB6 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 ABCC6P1-203ENST00000565566 1170 ntBASIC13.84□□□□□ -0.19
NCDNQ9UBB6 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 MIR4640-201ENST00000581824 90 ntBASIC13.84□□□□□ -0.19
NCDNQ9UBB6 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC13.84□□□□□ -0.19
NCDNQ9UBB6 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 RPL13AP3-202ENST00000494676 1473 ntBASIC13.84□□□□□ -0.19
NCDNQ9UBB6 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 CICP14-201ENST00000629111 2732 ntBASIC13.84□□□□□ -0.19
NCDNQ9UBB6 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCDNQ9UBB6 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NCDNQ9UBB6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NCDNQ9UBB6 ACE3P-201ENST00000423435 1973 ntBASIC13.83□□□□□ -0.19
NCDNQ9UBB6 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
NCDNQ9UBB6 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
NCDNQ9UBB6 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NCDNQ9UBB6 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NCDNQ9UBB6 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NCDNQ9UBB6 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
NCDNQ9UBB6 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NCDNQ9UBB6 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
NCDNQ9UBB6 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
NCDNQ9UBB6 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NCDNQ9UBB6 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NCDNQ9UBB6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms