Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 OR8B8-201ENST00000328064 1033 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 AC074019.1-201ENST00000428788 1096 ntBASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 CACNA1C-IT3-201ENST00000542680 622 ntTSL 3 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 AC145285.5-201ENST00000562217 361 ntBASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 AL353708.1-201ENST00000567904 1257 ntBASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 AC007191.1-201ENST00000623179 2995 ntBASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 MTA3-204ENST00000406911 2041 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 HLA-DQB3-203ENST00000425319 356 ntBASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 YY1P2-201ENST00000438766 948 ntBASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 RN7SL351P-201ENST00000469306 248 ntBASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 AL136982.5-201ENST00000605222 294 ntBASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 AP002353.1-201ENST00000528257 1599 ntBASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms