Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
ATP6V0A1Q93050 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 RPL3P2-204ENST00000413027 1203 ntBASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 CD81-209ENST00000492627 886 ntTSL 3 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 IGHV1-12-201ENST00000518307 205 ntBASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 KRT18P8-201ENST00000581937 1246 ntBASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 AL031673.1-201ENST00000611460 466 ntBASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 AC091769.1-201ENST00000619576 568 ntBASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 GOLGA8UP-201ENST00000527159 1755 ntBASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.61■□□□□ 0.09
ATP6V0A1Q93050 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 OR2W2P-201ENST00000406313 909 ntBASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 MIR1227-201ENST00000408484 88 ntBASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 OR52M2P-201ENST00000414298 959 ntBASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 PSMD4P1-201ENST00000433951 1109 ntBASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 VENTXP3-201ENST00000546480 773 ntBASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 AC005357.2-202ENST00000590507 1060 ntBASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms