Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CGNL1Q0VF96 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC18.83■□□□□ 0.6
CGNL1Q0VF96 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CGNL1Q0VF96 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CGNL1Q0VF96 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CGNL1Q0VF96 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CGNL1Q0VF96 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CGNL1Q0VF96 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CGNL1Q0VF96 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC18.83■□□□□ 0.6
CGNL1Q0VF96 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC18.83■□□□□ 0.6
CGNL1Q0VF96 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CGNL1Q0VF96 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CGNL1Q0VF96 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CGNL1Q0VF96 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CGNL1Q0VF96 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CGNL1Q0VF96 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CGNL1Q0VF96 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 LINP1-201ENST00000417112 917 ntTSL 2 BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 AQP7P5-201ENST00000428759 1049 ntBASIC18.82■□□□□ 0.6
CGNL1Q0VF96 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 AQP7P4-201ENST00000447083 1042 ntBASIC18.82■□□□□ 0.6
CGNL1Q0VF96 AQP7P2-201ENST00000453967 1041 ntBASIC18.82■□□□□ 0.6
CGNL1Q0VF96 RN7SL396P-201ENST00000471086 295 ntBASIC18.82■□□□□ 0.6
CGNL1Q0VF96 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 TRMT112P3-201ENST00000580149 358 ntBASIC18.82■□□□□ 0.6
CGNL1Q0VF96 AC011471.3-201ENST00000623576 402 ntBASIC18.82■□□□□ 0.6
CGNL1Q0VF96 AQP7P3-201ENST00000624547 1041 ntBASIC18.82■□□□□ 0.6
CGNL1Q0VF96 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 AC245140.2-201ENST00000624054 1939 ntBASIC18.82■□□□□ 0.6
CGNL1Q0VF96 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 CICP4-201ENST00000447359 2812 ntBASIC18.82■□□□□ 0.6
CGNL1Q0VF96 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 AC020763.3-201ENST00000625095 2904 ntBASIC18.82■□□□□ 0.6
CGNL1Q0VF96 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CGNL1Q0VF96 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 PPOX-204ENST00000462866 473 ntTSL 5 BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 CES1P2-201ENST00000566467 1242 ntBASIC18.81■□□□□ 0.6
CGNL1Q0VF96 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 AC010976.2-201ENST00000609697 852 ntBASIC18.81■□□□□ 0.6
CGNL1Q0VF96 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGNL1Q0VF96 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms