Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE2AP49459 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE2AP49459 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC8.98□□□□□ -0.97
UBE2AP49459 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE2AP49459 AC006001.1-201ENST00000325130 474 ntBASIC8.98□□□□□ -0.97
UBE2AP49459 RBM38-204ENST00000371219 760 ntTSL 2 BASIC8.98□□□□□ -0.97
UBE2AP49459 GZMB-202ENST00000382540 816 ntTSL 5 BASIC8.98□□□□□ -0.97
UBE2AP49459 RIMKLA-202ENST00000431473 8909 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE2AP49459 RPL7P3-201ENST00000441388 714 ntBASIC8.98□□□□□ -0.97
UBE2AP49459 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC8.98□□□□□ -0.97
UBE2AP49459 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
UBE2AP49459 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC8.98□□□□□ -0.97
UBE2AP49459 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC8.98□□□□□ -0.97
UBE2AP49459 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC8.98□□□□□ -0.97
UBE2AP49459 RAB43P1-201ENST00000561790 589 ntBASIC8.98□□□□□ -0.97
UBE2AP49459 AC100827.2-201ENST00000563214 1194 ntBASIC8.98□□□□□ -0.97
UBE2AP49459 ORC6-206ENST00000568364 888 ntTSL 5 BASIC8.98□□□□□ -0.97
UBE2AP49459 AC009884.2-201ENST00000603110 324 ntBASIC8.98□□□□□ -0.97
UBE2AP49459 AL358472.3-201ENST00000608147 415 ntBASIC8.98□□□□□ -0.97
UBE2AP49459 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
UBE2AP49459 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE2AP49459 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC8.98□□□□□ -0.97
UBE2AP49459 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
UBE2AP49459 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC8.98□□□□□ -0.97
UBE2AP49459 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE2AP49459 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE2AP49459 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE2AP49459 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC8.98□□□□□ -0.97
UBE2AP49459 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC8.98□□□□□ -0.97
UBE2AP49459 MAPT-IT1-201ENST00000624111 3016 ntBASIC8.98□□□□□ -0.97
UBE2AP49459 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE2AP49459 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC8.98□□□□□ -0.97
UBE2AP49459 GOLGA8CP-201ENST00000446144 5237 ntBASIC8.98□□□□□ -0.97
UBE2AP49459 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE2AP49459 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC8.98□□□□□ -0.97
UBE2AP49459 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE2AP49459 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC8.98□□□□□ -0.97
UBE2AP49459 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE2AP49459 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE2AP49459 MAP1A-201ENST00000300231 10258 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
UBE2AP49459 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
UBE2AP49459 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE2AP49459 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
UBE2AP49459 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC8.98□□□□□ -0.97
UBE2AP49459 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
UBE2AP49459 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC8.97□□□□□ -0.97
UBE2AP49459 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC8.97□□□□□ -0.97
UBE2AP49459 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
UBE2AP49459 CEP89-201ENST00000305768 5678 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
UBE2AP49459 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC8.97□□□□□ -0.97
UBE2AP49459 ANKRD36-201ENST00000420699 6269 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
UBE2AP49459 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
UBE2AP49459 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC8.97□□□□□ -0.97
UBE2AP49459 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC8.97□□□□□ -0.97
UBE2AP49459 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
UBE2AP49459 AMT-221ENST00000538581 2038 ntTSL 2 BASIC8.97□□□□□ -0.97
UBE2AP49459 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
UBE2AP49459 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
UBE2AP49459 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
UBE2AP49459 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
UBE2AP49459 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
UBE2AP49459 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
UBE2AP49459 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
UBE2AP49459 PLEKHG4-202ENST00000379344 4513 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
UBE2AP49459 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
UBE2AP49459 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
UBE2AP49459 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC8.97□□□□□ -0.97
UBE2AP49459 PDIA3P1-201ENST00000471856 1510 ntBASIC8.97□□□□□ -0.97
UBE2AP49459 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
UBE2AP49459 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
UBE2AP49459 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
UBE2AP49459 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
UBE2AP49459 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC8.97□□□□□ -0.97
UBE2AP49459 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
UBE2AP49459 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
UBE2AP49459 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
UBE2AP49459 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
UBE2AP49459 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
UBE2AP49459 CALY-203ENST00000368558 825 ntTSL 5 BASIC8.97□□□□□ -0.97
UBE2AP49459 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
UBE2AP49459 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC8.97□□□□□ -0.97
UBE2AP49459 USB1-202ENST00000423271 1217 ntTSL 2 BASIC8.97□□□□□ -0.97
UBE2AP49459 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC8.97□□□□□ -0.97
UBE2AP49459 RGS5-214ENST00000429865 754 ntTSL 3 BASIC8.97□□□□□ -0.97
UBE2AP49459 GAS5-209ENST00000430245 723 ntTSL 3 BASIC8.97□□□□□ -0.97
UBE2AP49459 AL161932.2-201ENST00000435436 679 ntBASIC8.97□□□□□ -0.97
UBE2AP49459 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC8.97□□□□□ -0.97
UBE2AP49459 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
UBE2AP49459 CTBP2P5-201ENST00000454986 1264 ntBASIC8.97□□□□□ -0.97
UBE2AP49459 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
UBE2AP49459 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC8.97□□□□□ -0.97
UBE2AP49459 NCK2-206ENST00000522586 490 ntTSL 5 BASIC8.97□□□□□ -0.97
UBE2AP49459 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC8.97□□□□□ -0.97
UBE2AP49459 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
UBE2AP49459 AC005225.4-201ENST00000557330 545 ntBASIC8.97□□□□□ -0.97
UBE2AP49459 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC8.97□□□□□ -0.97
UBE2AP49459 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
UBE2AP49459 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC8.97□□□□□ -0.97
UBE2AP49459 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC8.97□□□□□ -0.97
UBE2AP49459 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms