Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SOX2P48431 AC026271.4-201ENST00000578214 1833 ntBASIC12.4□□□□□ -0.42
SOX2P48431 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.4□□□□□ -0.42
SOX2P48431 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SOX2P48431 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
SOX2P48431 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.4□□□□□ -0.42
SOX2P48431 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SOX2P48431 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SOX2P48431 AC016694.1-201ENST00000434179 700 ntBASIC12.4□□□□□ -0.42
SOX2P48431 AL157407.1-201ENST00000435784 904 ntBASIC12.4□□□□□ -0.42
SOX2P48431 AL355994.2-201ENST00000447882 704 ntBASIC12.4□□□□□ -0.42
SOX2P48431 AC092183.1-201ENST00000469884 875 ntBASIC12.4□□□□□ -0.42
SOX2P48431 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SOX2P48431 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.4□□□□□ -0.42
SOX2P48431 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SOX2P48431 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.4□□□□□ -0.42
SOX2P48431 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.4□□□□□ -0.42
SOX2P48431 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
SOX2P48431 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.4□□□□□ -0.42
SOX2P48431 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.4□□□□□ -0.42
SOX2P48431 AC124068.2-201ENST00000569473 1109 ntBASIC12.4□□□□□ -0.42
SOX2P48431 AC132192.2-201ENST00000596206 1147 ntBASIC12.4□□□□□ -0.42
SOX2P48431 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SOX2P48431 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SOX2P48431 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SOX2P48431 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SOX2P48431 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SOX2P48431 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SOX2P48431 AC060814.4-201ENST00000594169 2163 ntBASIC12.4□□□□□ -0.42
SOX2P48431 AC118758.2-201ENST00000614242 2813 ntBASIC12.4□□□□□ -0.42
SOX2P48431 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SOX2P48431 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SOX2P48431 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.4□□□□□ -0.42
SOX2P48431 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.4□□□□□ -0.42
SOX2P48431 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.4□□□□□ -0.43
SOX2P48431 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
SOX2P48431 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
SOX2P48431 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
SOX2P48431 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.4□□□□□ -0.43
SOX2P48431 AC007952.5-201ENST00000572818 1486 ntBASIC12.4□□□□□ -0.43
SOX2P48431 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.4□□□□□ -0.43
SOX2P48431 MSNP1-201ENST00000511640 1732 ntBASIC12.4□□□□□ -0.43
SOX2P48431 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
SOX2P48431 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
SOX2P48431 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.39□□□□□ -0.43
SOX2P48431 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SOX2P48431 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC12.39□□□□□ -0.43
SOX2P48431 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
SOX2P48431 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.39□□□□□ -0.43
SOX2P48431 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SOX2P48431 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.39□□□□□ -0.43
SOX2P48431 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.39□□□□□ -0.43
SOX2P48431 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SOX2P48431 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.39□□□□□ -0.43
SOX2P48431 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.39□□□□□ -0.43
SOX2P48431 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SOX2P48431 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 CHMP1AP1-201ENST00000445563 662 ntBASIC12.39□□□□□ -0.43
SOX2P48431 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
SOX2P48431 RN7SL837P-201ENST00000463010 287 ntBASIC12.39□□□□□ -0.43
SOX2P48431 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.39□□□□□ -0.43
SOX2P48431 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SOX2P48431 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SOX2P48431 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.39□□□□□ -0.43
SOX2P48431 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.39□□□□□ -0.43
SOX2P48431 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
SOX2P48431 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
SOX2P48431 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SOX2P48431 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.39□□□□□ -0.43
SOX2P48431 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.39□□□□□ -0.43
SOX2P48431 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.39□□□□□ -0.43
SOX2P48431 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.39□□□□□ -0.43
SOX2P48431 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.39□□□□□ -0.43
SOX2P48431 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.39□□□□□ -0.43
SOX2P48431 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.39□□□□□ -0.43
SOX2P48431 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SOX2P48431 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.39□□□□□ -0.43
SOX2P48431 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SOX2P48431 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
SOX2P48431 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms